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As of 1-Dec-2021 number of released structures: 11785
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NDB ID: 6P2H  PDB ID: 6P2H 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
6P2H|1|A|A|236P2H|1|A|G|46tWS
6P2H|1|A|A|236P2H|1|A|U|22s35
6P2H|1|A|A|236P2H|1|A|U|25s55
6P2H|1|A|A|246P2H|1|A|A|52
6P2H|1|A|A|246P2H|1|A|A|77s55
6P2H|1|A|A|246P2H|1|A|C|53
6P2H|1|A|A|246P2H|1|A|C|54s35
6P2H|1|A|A|246P2H|1|A|U|75cHW
6P2H|1|A|A|306P2H|1|A|A|300BPh
6P2H|1|A|A|306P2H|1|A|A|31s35
6P2H|1|A|A|306P2H|1|A|C|29s53
6P2H|1|A|A|306P2H|1|A|G|41s55
6P2H|1|A|A|306P2H|1|A|U|40cWW
6P2H|1|A|A|316P2H|1|A|A|30s53
6P2H|1|A|A|316P2H|1|A|A|310BPh
6P2H|1|A|A|316P2H|1|A|A|32s35
6P2H|1|A|A|316P2H|1|A|U|39cWW
6P2H|1|A|A|316P2H|1|A|U|40s55
6P2H|1|A|A|326P2H|1|A|A|31s53
6P2H|1|A|A|326P2H|1|A|A|320BPh
6P2H|1|A|A|326P2H|1|A|A|33s35
6P2H|1|A|A|326P2H|1|A|U|39s55
6P2H|1|A|A|336P2H|1|A|A|32s53
6P2H|1|A|A|336P2H|1|A|A|330BPh
6P2H|1|A|A|336P2H|1|A|A|67tWH
6P2H|1|A|A|336P2H|1|A|G|37cSS
6P2H|1|A|A|336P2H|1|A|G|38ncSS
6P2H|1|A|A|336P2H|1|A|U|34s35
6P2H|1|A|A|356P2H|1|A|A|35n0BP
6P2H|1|A|A|356P2H|1|A|A|65tHW
6P2H|1|A|A|356P2H|1|A|C|62s53
6P2H|1|A|A|356P2H|1|A|G|37s55
6P2H|1|A|A|356P2H|1|A|G|63s35n6BP
6P2H|1|A|A|356P2H|1|A|U|64s35
6P2H|1|A|A|456P2H|1|A|A|450BPh
6P2H|1|A|A|456P2H|1|A|C|26ns55
6P2H|1|A|A|456P2H|1|A|G|44s53
6P2H|1|A|A|456P2H|1|A|G|46s35
6P2H|1|A|A|456P2H|1|A|U|25cWW
6P2H|1|A|A|526P2H|1|A|A|520BPh
6P2H|1|A|A|526P2H|1|A|A|77cSW
6P2H|1|A|A|526P2H|1|A|C|51s53
6P2H|1|A|A|526P2H|1|A|C|53s33
6P2H|1|A|A|526P2H|1|A|G|46ns33
6P2H|1|A|A|526P2H|1|A|U|22cWW
6P2H|1|A|A|556P2H|1|A|A|550BPh
6P2H|1|A|A|556P2H|1|A|C|54s53
6P2H|1|A|A|556P2H|1|A|G|56s35
6P2H|1|A|A|556P2H|1|A|G|74s55
6P2H|1|A|A|556P2H|1|A|U|73cWW
6P2H|1|A|A|596P2H|1|A|A|590BPh
6P2H|1|A|A|596P2H|1|A|A|60s35
6P2H|1|A|A|596P2H|1|A|C|70ns55
6P2H|1|A|A|596P2H|1|A|G|58s53
6P2H|1|A|A|596P2H|1|A|U|69cWW
6P2H|1|A|A|606P2H|1|A|A|59s53
6P2H|1|A|A|606P2H|1|A|A|600BPh
6P2H|1|A|A|606P2H|1|A|A|68ncWW
6P2H|1|A|A|606P2H|1|A|C|61s35
6P2H|1|A|A|606P2H|1|A|G|38ns33
6P2H|1|A|A|606P2H|1|A|U|69s55
6P2H|1|A|A|656P2H|1|A|A|35tWH
6P2H|1|A|A|656P2H|1|A|A|66s35
6P2H|1|A|A|656P2H|1|A|G|632BPh
6P2H|1|A|A|656P2H|1|A|U|34ntHW
6P2H|1|A|A|656P2H|1|A|U|64s55
6P2H|1|A|A|666P2H|1|A|A|65s53
6P2H|1|A|A|666P2H|1|A|A|66n0BP
6P2H|1|A|A|666P2H|1|A|A|67s35
6P2H|1|A|A|666P2H|1|A|C|62cWS
6P2H|1|A|A|666P2H|1|A|U|34tHW
6P2H|1|A|A|676P2H|1|A|A|33tHW
6P2H|1|A|A|676P2H|1|A|A|66s53
6P2H|1|A|A|676P2H|1|A|A|68s35
6P2H|1|A|A|676P2H|1|A|G|38tWS
6P2H|1|A|A|686P2H|1|A|A|60ncWW
6P2H|1|A|A|686P2H|1|A|A|67s53
6P2H|1|A|A|686P2H|1|A|G|38s53
6P2H|1|A|A|686P2H|1|A|U|69s35
6P2H|1|A|A|776P2H|1|A|A|24s55
6P2H|1|A|A|776P2H|1|A|A|52cWS
6P2H|1|A|A|776P2H|1|A|A|77n0BP
6P2H|1|A|A|776P2H|1|A|C|78s35
6P2H|1|A|A|776P2H|1|A|U|75ns55
6P2H|1|A|A|806P2H|1|A|A|800BPh
6P2H|1|A|A|806P2H|1|A|C|50ns55
6P2H|1|A|A|806P2H|1|A|C|79s53
6P2H|1|A|A|806P2H|1|A|C|81s35
6P2H|1|A|A|806P2H|1|A|G|21s55
6P2H|1|A|A|806P2H|1|A|U|20cWW
6P2H|1|A|A|806P2H|1|A|U|49
6P2H|1|A|A|846P2H|1|A|A|840BPh
6P2H|1|A|A|846P2H|1|A|C|83s53
6P2H|1|A|A|846P2H|1|A|G|85s35
6P2H|1|A|C|266P2H|1|A|A|45ns55
6P2H|1|A|C|266P2H|1|A|C|260BPh
6P2H|1|A|C|266P2H|1|A|G|44cWW
6P2H|1|A|C|266P2H|1|A|U|25s53
6P2H|1|A|C|266P2H|1|A|U|27s35
6P2H|1|A|C|286P2H|1|A|C|280BPh
6P2H|1|A|C|286P2H|1|A|C|29s35
6P2H|1|A|C|286P2H|1|A|G|42cWW
6P2H|1|A|C|286P2H|1|A|G|43s55
6P2H|1|A|C|286P2H|1|A|U|27s53
6P2H|1|A|C|296P2H|1|A|A|30s35
6P2H|1|A|C|296P2H|1|A|C|28s53
6P2H|1|A|C|296P2H|1|A|C|290BPh
6P2H|1|A|C|296P2H|1|A|G|41cWW
6P2H|1|A|C|296P2H|1|A|G|42s55
6P2H|1|A|C|476P2H|1|A|C|470BPh
6P2H|1|A|C|476P2H|1|A|C|48s35
6P2H|1|A|C|476P2H|1|A|G|21
6P2H|1|A|C|476P2H|1|A|U|20ntHS
6P2H|1|A|C|486P2H|1|A|C|47s53
6P2H|1|A|C|486P2H|1|A|C|480BPh
6P2H|1|A|C|486P2H|1|A|U|49s33
6P2H|1|A|C|506P2H|1|A|A|80ns55
6P2H|1|A|C|506P2H|1|A|C|500BPh
6P2H|1|A|C|506P2H|1|A|C|51s35
6P2H|1|A|C|506P2H|1|A|C|79cWS
6P2H|1|A|C|506P2H|1|A|U|49
6P2H|1|A|C|516P2H|1|A|A|52s35
6P2H|1|A|C|516P2H|1|A|C|50s53
6P2H|1|A|C|516P2H|1|A|C|510BPh
6P2H|1|A|C|536P2H|1|A|A|24
6P2H|1|A|C|536P2H|1|A|A|52s33
6P2H|1|A|C|546P2H|1|A|A|24s53
6P2H|1|A|C|546P2H|1|A|A|55s35
6P2H|1|A|C|546P2H|1|A|C|53
6P2H|1|A|C|546P2H|1|A|C|540BPh
6P2H|1|A|C|546P2H|1|A|G|74cWW
6P2H|1|A|C|546P2H|1|A|U|258BPh
6P2H|1|A|C|616P2H|1|A|A|60s53
6P2H|1|A|C|616P2H|1|A|C|610BPh
6P2H|1|A|C|616P2H|1|A|C|62s35
6P2H|1|A|C|616P2H|1|A|G|38cWW
6P2H|1|A|C|626P2H|1|A|A|35s35
6P2H|1|A|C|626P2H|1|A|A|66cSW
6P2H|1|A|C|626P2H|1|A|C|61s53
6P2H|1|A|C|626P2H|1|A|C|620BPh
6P2H|1|A|C|626P2H|1|A|G|37cWW
6P2H|1|A|C|626P2H|1|A|G|38ns55
6P2H|1|A|C|706P2H|1|A|A|59ns55
6P2H|1|A|C|706P2H|1|A|C|700BPh
6P2H|1|A|C|706P2H|1|A|G|58cWW
6P2H|1|A|C|706P2H|1|A|G|71ns35
6P2H|1|A|C|706P2H|1|A|U|69s53
6P2H|1|A|C|726P2H|1|A|C|720BPh
6P2H|1|A|C|726P2H|1|A|G|56cWW
6P2H|1|A|C|726P2H|1|A|G|71s53
6P2H|1|A|C|726P2H|1|A|U|73s35
6P2H|1|A|C|766P2H|1|A|C|760BPh
6P2H|1|A|C|766P2H|1|A|G|186BPh
6P2H|1|A|C|786P2H|1|A|A|77s538BPh
6P2H|1|A|C|786P2H|1|A|C|780BPh
6P2H|1|A|C|786P2H|1|A|C|79s35
6P2H|1|A|C|796P2H|1|A|A|80s35
6P2H|1|A|C|796P2H|1|A|C|50cSW
6P2H|1|A|C|796P2H|1|A|C|78s53
6P2H|1|A|C|796P2H|1|A|C|790BPh
6P2H|1|A|C|796P2H|1|A|G|21cWW
6P2H|1|A|C|816P2H|1|A|A|80s53
6P2H|1|A|C|816P2H|1|A|C|810BPh
6P2H|1|A|C|816P2H|1|A|C|82s35
6P2H|1|A|C|816P2H|1|A|G|19cWW
6P2H|1|A|C|826P2H|1|A|C|81s53
6P2H|1|A|C|826P2H|1|A|C|820BPh
6P2H|1|A|C|826P2H|1|A|C|83s35
6P2H|1|A|C|826P2H|1|A|G|18cWW
6P2H|1|A|C|826P2H|1|A|G|19s55
6P2H|1|A|C|836P2H|1|A|A|84s35
6P2H|1|A|C|836P2H|1|A|C|82s53
6P2H|1|A|C|836P2H|1|A|C|830BPh
6P2H|1|A|C|836P2H|1|A|G|18s55
6P2H|1|A|G|186P2H|1|A|C|82cWW
6P2H|1|A|G|186P2H|1|A|C|83s55
6P2H|1|A|G|186P2H|1|A|G|180BPh
6P2H|1|A|G|186P2H|1|A|G|19s35
6P2H|1|A|G|196P2H|1|A|C|81cWW
6P2H|1|A|G|196P2H|1|A|C|82s55
6P2H|1|A|G|196P2H|1|A|G|18s53
6P2H|1|A|G|196P2H|1|A|G|190BPh
6P2H|1|A|G|196P2H|1|A|U|20s35
6P2H|1|A|G|216P2H|1|A|A|80s55
6P2H|1|A|G|216P2H|1|A|C|79cWW
6P2H|1|A|G|216P2H|1|A|G|210BPh
6P2H|1|A|G|216P2H|1|A|U|20s53
6P2H|1|A|G|376P2H|1|A|A|33cSS
6P2H|1|A|G|376P2H|1|A|A|35s55
6P2H|1|A|G|376P2H|1|A|C|62cWW
6P2H|1|A|G|376P2H|1|A|G|370BPh
6P2H|1|A|G|376P2H|1|A|G|38s35
6P2H|1|A|G|376P2H|1|A|U|34ncSS
6P2H|1|A|G|386P2H|1|A|A|33ncSS
6P2H|1|A|G|386P2H|1|A|A|60ns33
6P2H|1|A|G|386P2H|1|A|A|67tSW
6P2H|1|A|G|386P2H|1|A|A|68s35
6P2H|1|A|G|386P2H|1|A|C|61cWW
6P2H|1|A|G|386P2H|1|A|C|62ns55
6P2H|1|A|G|386P2H|1|A|G|37s53
6P2H|1|A|G|386P2H|1|A|G|380BPh
6P2H|1|A|G|416P2H|1|A|A|30s55
6P2H|1|A|G|416P2H|1|A|C|29cWW
6P2H|1|A|G|416P2H|1|A|G|410BPh
6P2H|1|A|G|416P2H|1|A|G|42s35
6P2H|1|A|G|416P2H|1|A|U|40s53
6P2H|1|A|G|426P2H|1|A|C|28cWW
6P2H|1|A|G|426P2H|1|A|C|29s55
6P2H|1|A|G|426P2H|1|A|G|41s53
6P2H|1|A|G|426P2H|1|A|G|420BPh
6P2H|1|A|G|426P2H|1|A|G|43s35
6P2H|1|A|G|436P2H|1|A|C|28s55
6P2H|1|A|G|436P2H|1|A|G|42s53
6P2H|1|A|G|436P2H|1|A|G|430BPh
6P2H|1|A|G|436P2H|1|A|G|44s35
6P2H|1|A|G|436P2H|1|A|U|27cWW
6P2H|1|A|G|446P2H|1|A|A|45s35
6P2H|1|A|G|446P2H|1|A|C|26cWW
6P2H|1|A|G|446P2H|1|A|G|43s53
6P2H|1|A|G|446P2H|1|A|G|440BPh
6P2H|1|A|G|446P2H|1|A|U|27s55
6P2H|1|A|G|466P2H|1|A|A|23tSW
6P2H|1|A|G|466P2H|1|A|A|45s53
6P2H|1|A|G|466P2H|1|A|A|52ns33
6P2H|1|A|G|466P2H|1|A|G|460BPh
6P2H|1|A|G|466P2H|1|A|U|22s35
6P2H|1|A|G|466P2H|1|A|U|25s55
6P2H|1|A|G|566P2H|1|A|A|55s53
6P2H|1|A|G|566P2H|1|A|C|72cWW
6P2H|1|A|G|566P2H|1|A|G|560BPh
6P2H|1|A|G|566P2H|1|A|U|57s35
6P2H|1|A|G|566P2H|1|A|U|73s55
6P2H|1|A|G|586P2H|1|A|A|59s35
6P2H|1|A|G|586P2H|1|A|C|70cWW
6P2H|1|A|G|586P2H|1|A|G|580BPh
6P2H|1|A|G|586P2H|1|A|G|71s55
6P2H|1|A|G|636P2H|1|A|A|35s53
6P2H|1|A|G|636P2H|1|A|U|64cSH
6P2H|1|A|G|716P2H|1|A|C|70ns53
6P2H|1|A|G|716P2H|1|A|C|72s35
6P2H|1|A|G|716P2H|1|A|G|58s55
6P2H|1|A|G|716P2H|1|A|G|71n0BP
6P2H|1|A|G|716P2H|1|A|U|57cWW
6P2H|1|A|G|746P2H|1|A|A|55s55
6P2H|1|A|G|746P2H|1|A|C|54cWW
6P2H|1|A|G|746P2H|1|A|G|740BPh
6P2H|1|A|G|746P2H|1|A|U|73s53
6P2H|1|A|G|746P2H|1|A|U|75s33
6P2H|1|A|G|856P2H|1|A|A|84s53
6P2H|1|A|G|856P2H|1|A|G|850BPh
6P2H|1|A|U|206P2H|1|A|A|80cWW
6P2H|1|A|U|206P2H|1|A|C|47ntSH
6P2H|1|A|U|206P2H|1|A|G|19s53
6P2H|1|A|U|206P2H|1|A|G|21s35
6P2H|1|A|U|206P2H|1|A|U|200BPh
6P2H|1|A|U|226P2H|1|A|A|23s53
6P2H|1|A|U|226P2H|1|A|A|52cWW
6P2H|1|A|U|226P2H|1|A|C|47n9BP
6P2H|1|A|U|226P2H|1|A|G|46s53
6P2H|1|A|U|226P2H|1|A|U|220BPh
6P2H|1|A|U|256P2H|1|A|A|23s55
6P2H|1|A|U|256P2H|1|A|A|24
6P2H|1|A|U|256P2H|1|A|A|45cWW
6P2H|1|A|U|256P2H|1|A|C|26s35
6P2H|1|A|U|256P2H|1|A|C|53
6P2H|1|A|U|256P2H|1|A|G|46s55
6P2H|1|A|U|256P2H|1|A|U|250BPh
6P2H|1|A|U|276P2H|1|A|C|26s53
6P2H|1|A|U|276P2H|1|A|C|28s35
6P2H|1|A|U|276P2H|1|A|G|43cWW
6P2H|1|A|U|276P2H|1|A|G|44s55
6P2H|1|A|U|276P2H|1|A|U|270BPh
6P2H|1|A|U|346P2H|1|A|A|33s53
6P2H|1|A|U|346P2H|1|A|A|65ntWH
6P2H|1|A|U|346P2H|1|A|A|66tWH
6P2H|1|A|U|346P2H|1|A|G|37ncSS
6P2H|1|A|U|346P2H|1|A|U|340BPh
6P2H|1|A|U|396P2H|1|A|A|31cWW
6P2H|1|A|U|396P2H|1|A|A|32s55
6P2H|1|A|U|396P2H|1|A|U|390BPh
6P2H|1|A|U|396P2H|1|A|U|40s35
6P2H|1|A|U|406P2H|1|A|A|30cWW
6P2H|1|A|U|406P2H|1|A|A|31s55
6P2H|1|A|U|406P2H|1|A|G|41s35
6P2H|1|A|U|406P2H|1|A|U|39s53
6P2H|1|A|U|406P2H|1|A|U|400BPh
6P2H|1|A|U|496P2H|1|A|A|80
6P2H|1|A|U|496P2H|1|A|C|48s33
6P2H|1|A|U|496P2H|1|A|C|50
6P2H|1|A|U|496P2H|1|A|U|490BPh
6P2H|1|A|U|576P2H|1|A|G|56s53
6P2H|1|A|U|576P2H|1|A|G|71cWW
6P2H|1|A|U|576P2H|1|A|U|570BPh
6P2H|1|A|U|646P2H|1|A|A|35s535BPh
6P2H|1|A|U|646P2H|1|A|A|65s55
6P2H|1|A|U|646P2H|1|A|G|63cHS
6P2H|1|A|U|646P2H|1|A|U|640BPh
6P2H|1|A|U|696P2H|1|A|A|59cWW
6P2H|1|A|U|696P2H|1|A|A|60s55
6P2H|1|A|U|696P2H|1|A|A|68s53
6P2H|1|A|U|696P2H|1|A|C|70s35
6P2H|1|A|U|696P2H|1|A|U|690BPh
6P2H|1|A|U|736P2H|1|A|A|55cWW
6P2H|1|A|U|736P2H|1|A|C|72s53
6P2H|1|A|U|736P2H|1|A|G|56s55
6P2H|1|A|U|736P2H|1|A|G|74s35
6P2H|1|A|U|736P2H|1|A|U|730BPh
6P2H|1|A|U|756P2H|1|A|A|24cWH
6P2H|1|A|U|756P2H|1|A|A|77ns55
6P2H|1|A|U|756P2H|1|A|G|74s33
6P2H|1|A|U|756P2H|1|A|U|750BPh


Base-PairsCount (31)Relative Frequency
cWW200.645
cWH10.032
tWH30.097
cWS30.097
tWS20.065
cHS10.032
cSS10.032
Base-PhosphateCount (61)Relative Frequency
2BPh10.016
5BPh10.016
6BPh10.016
8BPh20.033
0BPh560.918
Base-StackingCount (37)Relative Frequency
s3330.081
s53160.432
s55180.486

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)