A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 5-Aug-2020 number of released structures: 10886
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NDB ID: 6R9J  PDB ID: 6R9J 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
6R9J|1|B|A|36R9J|1|B|A|4ns35
6R9J|1|B|A|46R9J|1|B|A|3ns53
6R9J|1|B|A|46R9J|1|B|A|40BPh
6R9J|1|B|A|46R9J|1|B|A|5s35
6R9J|1|B|A|56R9J|1|B|A|4s53
6R9J|1|B|A|56R9J|1|B|A|50BPh
6R9J|1|B|A|56R9J|1|B|A|6s35
6R9J|1|B|A|66R9J|1|B|A|5s53
6R9J|1|B|A|66R9J|1|B|A|60BPh
6R9J|1|B|A|66R9J|1|B|A|7s35
6R9J|1|B|A|76R9J|1|B|A|6s53
6R9J|1|B|A|76R9J|1|B|A|70BPh


Base-PairsCount (0)Relative Frequency
Base-PhosphateCount (4)Relative Frequency
0BPh41.000
Base-StackingCount (0)Relative Frequency

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)