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As of 18-Nov-2020 number of released structures: 11059
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NDB ID: 6TB7  PDB ID: 6TB7 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
6TB7|1|A|A|106TB7|1|A|A|10n0BP
6TB7|1|A|A|106TB7|1|A|A|7
6TB7|1|A|A|106TB7|1|A|A|87BPh
6TB7|1|A|A|106TB7|1|A|C|15s33n6BP
6TB7|1|A|A|106TB7|1|A|G|16n6BP
6TB7|1|A|A|116TB7|1|A|A|11n0BP
6TB7|1|A|A|186TB7|1|A|A|180BPh
6TB7|1|A|A|186TB7|1|A|A|44s55
6TB7|1|A|A|186TB7|1|A|G|19s35
6TB7|1|A|A|186TB7|1|A|U|17s53
6TB7|1|A|A|186TB7|1|A|U|43cWW
6TB7|1|A|A|296TB7|1|A|A|290BPh
6TB7|1|A|A|296TB7|1|A|A|30s35
6TB7|1|A|A|306TB7|1|A|A|29s53
6TB7|1|A|A|306TB7|1|A|A|300BPh
6TB7|1|A|A|306TB7|1|A|A|31s35
6TB7|1|A|A|306TB7|1|A|G|28
6TB7|1|A|A|316TB7|1|A|A|30s53
6TB7|1|A|A|316TB7|1|A|A|310BPh
6TB7|1|A|A|316TB7|1|A|G|28tHS
6TB7|1|A|A|316TB7|1|A|G|32s35
6TB7|1|A|A|356TB7|1|A|A|350BPh
6TB7|1|A|A|356TB7|1|A|C|34s53
6TB7|1|A|A|356TB7|1|A|C|37s35
6TB7|1|A|A|356TB7|1|A|G|24cWW
6TB7|1|A|A|356TB7|1|A|G|25s55
6TB7|1|A|A|396TB7|1|A|A|40s35
6TB7|1|A|A|396TB7|1|A|C|37
6TB7|1|A|A|396TB7|1|A|G|23s55
6TB7|1|A|A|396TB7|1|A|U|22cWW
6TB7|1|A|A|406TB7|1|A|A|39s53
6TB7|1|A|A|406TB7|1|A|A|400BPh
6TB7|1|A|A|406TB7|1|A|U|21cWW
6TB7|1|A|A|406TB7|1|A|U|22s55
6TB7|1|A|A|406TB7|1|A|U|41s35
6TB7|1|A|A|446TB7|1|A|A|18s55
6TB7|1|A|A|446TB7|1|A|A|440BPh
6TB7|1|A|A|446TB7|1|A|C|45s35
6TB7|1|A|A|446TB7|1|A|U|17cWW
6TB7|1|A|A|446TB7|1|A|U|43s53
6TB7|1|A|A|496TB7|1|A|A|490BPh
6TB7|1|A|A|496TB7|1|A|G|48s53
6TB7|1|A|A|496TB7|1|A|G|50s35
6TB7|1|A|A|496TB7|1|A|U|4cWW
6TB7|1|A|A|76TB7|1|A|A|70BPh
6TB7|1|A|A|76TB7|1|A|A|8cSH
6TB7|1|A|A|76TB7|1|A|C|6s53
6TB7|1|A|A|76TB7|1|A|G|16s35
6TB7|1|A|A|76TB7|1|A|G|47s55
6TB7|1|A|A|76TB7|1|A|U|46cWW
6TB7|1|A|A|86TB7|1|A|A|7cHS
6TB7|1|A|A|86TB7|1|A|A|8n0BP
6TB7|1|A|A|86TB7|1|A|C|9s35
6TB7|1|A|C|126TB7|1|A|C|120BPh
6TB7|1|A|C|126TB7|1|A|C|13s35
6TB7|1|A|C|136TB7|1|A|C|12s53
6TB7|1|A|C|136TB7|1|A|C|130BPh
6TB7|1|A|C|136TB7|1|A|C|14s35
6TB7|1|A|C|136TB7|1|A|G|38cWW
6TB7|1|A|C|146TB7|1|A|C|13s53
6TB7|1|A|C|146TB7|1|A|C|140BPh
6TB7|1|A|C|146TB7|1|A|C|15s35
6TB7|1|A|C|146TB7|1|A|G|36cWW
6TB7|1|A|C|146TB7|1|A|G|38s55
6TB7|1|A|C|156TB7|1|A|A|10s33
6TB7|1|A|C|156TB7|1|A|C|14s53
6TB7|1|A|C|156TB7|1|A|C|150BPh
6TB7|1|A|C|156TB7|1|A|G|36ns55
6TB7|1|A|C|266TB7|1|A|C|260BPh
6TB7|1|A|C|266TB7|1|A|C|27s35
6TB7|1|A|C|266TB7|1|A|G|25s53
6TB7|1|A|C|266TB7|1|A|G|33cWW
6TB7|1|A|C|276TB7|1|A|C|26s53
6TB7|1|A|C|276TB7|1|A|C|270BPh
6TB7|1|A|C|276TB7|1|A|G|28s35
6TB7|1|A|C|276TB7|1|A|G|32cWW
6TB7|1|A|C|276TB7|1|A|G|33s55
6TB7|1|A|C|36TB7|1|A|C|30BPh
6TB7|1|A|C|36TB7|1|A|G|2s53
6TB7|1|A|C|36TB7|1|A|G|50cWW
6TB7|1|A|C|36TB7|1|A|U|4s35
6TB7|1|A|C|346TB7|1|A|A|35s35
6TB7|1|A|C|346TB7|1|A|C|340BPh
6TB7|1|A|C|346TB7|1|A|G|25cWW
6TB7|1|A|C|346TB7|1|A|G|33s53
6TB7|1|A|C|376TB7|1|A|A|35s53
6TB7|1|A|C|376TB7|1|A|C|370BPh
6TB7|1|A|C|376TB7|1|A|G|23cWW
6TB7|1|A|C|376TB7|1|A|G|24s55
6TB7|1|A|C|426TB7|1|A|C|420BPh
6TB7|1|A|C|426TB7|1|A|G|19cWW
6TB7|1|A|C|426TB7|1|A|G|20s55
6TB7|1|A|C|426TB7|1|A|U|41s53
6TB7|1|A|C|426TB7|1|A|U|43s35
6TB7|1|A|C|456TB7|1|A|A|44s53
6TB7|1|A|C|456TB7|1|A|C|450BPh
6TB7|1|A|C|456TB7|1|A|G|16cWW
6TB7|1|A|C|456TB7|1|A|U|46ns35
6TB7|1|A|C|516TB7|1|A|C|510BPh
6TB7|1|A|C|516TB7|1|A|C|52s35
6TB7|1|A|C|516TB7|1|A|G|2cWW
6TB7|1|A|C|516TB7|1|A|G|50s53
6TB7|1|A|C|526TB7|1|A|C|51s53
6TB7|1|A|C|526TB7|1|A|C|520BPh
6TB7|1|A|C|526TB7|1|A|G|1cWW
6TB7|1|A|C|526TB7|1|A|G|2s55
6TB7|1|A|C|66TB7|1|A|A|7s35
6TB7|1|A|C|66TB7|1|A|C|60BPh
6TB7|1|A|C|66TB7|1|A|G|47cWW
6TB7|1|A|C|66TB7|1|A|G|48s55
6TB7|1|A|C|66TB7|1|A|U|5s53
6TB7|1|A|C|96TB7|1|A|A|7
6TB7|1|A|C|96TB7|1|A|A|8s539BPh
6TB7|1|A|C|96TB7|1|A|C|90BPh
6TB7|1|A|C|96TB7|1|A|G|16
6TB7|1|A|G|16TB7|1|A|C|52cWW
6TB7|1|A|G|16TB7|1|A|G|1n0BP
6TB7|1|A|G|16TB7|1|A|G|2s35
6TB7|1|A|G|166TB7|1|A|A|7s53
6TB7|1|A|G|166TB7|1|A|C|45cWW
6TB7|1|A|G|166TB7|1|A|G|16n0BP
6TB7|1|A|G|166TB7|1|A|U|17s35
6TB7|1|A|G|166TB7|1|A|U|46s55
6TB7|1|A|G|196TB7|1|A|A|18s53
6TB7|1|A|G|196TB7|1|A|C|42cWW
6TB7|1|A|G|196TB7|1|A|G|190BPh
6TB7|1|A|G|196TB7|1|A|G|20s35
6TB7|1|A|G|196TB7|1|A|U|43s55
6TB7|1|A|G|26TB7|1|A|C|3s35
6TB7|1|A|G|26TB7|1|A|C|51cWW
6TB7|1|A|G|26TB7|1|A|C|52s55
6TB7|1|A|G|26TB7|1|A|G|1s53
6TB7|1|A|G|26TB7|1|A|G|20BPh
6TB7|1|A|G|206TB7|1|A|C|42s55
6TB7|1|A|G|206TB7|1|A|G|19s53
6TB7|1|A|G|206TB7|1|A|U|21s35
6TB7|1|A|G|206TB7|1|A|U|41cWW
6TB7|1|A|G|236TB7|1|A|A|39s55
6TB7|1|A|G|236TB7|1|A|C|37cWW
6TB7|1|A|G|236TB7|1|A|G|230BPh
6TB7|1|A|G|236TB7|1|A|G|24s35
6TB7|1|A|G|236TB7|1|A|U|22s53
6TB7|1|A|G|246TB7|1|A|A|35cWW
6TB7|1|A|G|246TB7|1|A|C|37s55
6TB7|1|A|G|246TB7|1|A|G|23s53
6TB7|1|A|G|246TB7|1|A|G|24n0BP
6TB7|1|A|G|246TB7|1|A|G|25s35
6TB7|1|A|G|256TB7|1|A|A|35s55
6TB7|1|A|G|256TB7|1|A|C|26s35
6TB7|1|A|G|256TB7|1|A|C|34cWW
6TB7|1|A|G|256TB7|1|A|G|24s53
6TB7|1|A|G|256TB7|1|A|G|250BPh
6TB7|1|A|G|286TB7|1|A|A|31tSH3BPh
6TB7|1|A|G|286TB7|1|A|C|27s53
6TB7|1|A|G|286TB7|1|A|G|280BPh
6TB7|1|A|G|286TB7|1|A|G|32s55
6TB7|1|A|G|326TB7|1|A|A|31s53
6TB7|1|A|G|326TB7|1|A|C|27cWW
6TB7|1|A|G|326TB7|1|A|G|28s55
6TB7|1|A|G|326TB7|1|A|G|320BPh
6TB7|1|A|G|326TB7|1|A|G|33s35
6TB7|1|A|G|336TB7|1|A|C|26cWW
6TB7|1|A|G|336TB7|1|A|C|27s55
6TB7|1|A|G|336TB7|1|A|C|34s35
6TB7|1|A|G|336TB7|1|A|G|32s53
6TB7|1|A|G|336TB7|1|A|G|330BPh
6TB7|1|A|G|366TB7|1|A|C|14cWW
6TB7|1|A|G|366TB7|1|A|C|15ns55
6TB7|1|A|G|366TB7|1|A|G|38s35
6TB7|1|A|G|386TB7|1|A|C|13cWW
6TB7|1|A|G|386TB7|1|A|C|14s55
6TB7|1|A|G|386TB7|1|A|G|36s53
6TB7|1|A|G|386TB7|1|A|G|380BPh
6TB7|1|A|G|476TB7|1|A|A|7s55
6TB7|1|A|G|476TB7|1|A|C|6cWW
6TB7|1|A|G|476TB7|1|A|G|470BPh
6TB7|1|A|G|476TB7|1|A|G|48s35
6TB7|1|A|G|476TB7|1|A|U|46s53
6TB7|1|A|G|486TB7|1|A|A|49s35
6TB7|1|A|G|486TB7|1|A|C|6s55
6TB7|1|A|G|486TB7|1|A|G|47s53
6TB7|1|A|G|486TB7|1|A|U|5cWW
6TB7|1|A|G|506TB7|1|A|A|49s53
6TB7|1|A|G|506TB7|1|A|C|3cWW
6TB7|1|A|G|506TB7|1|A|C|51s35
6TB7|1|A|G|506TB7|1|A|G|500BPh
6TB7|1|A|G|506TB7|1|A|U|4s55
6TB7|1|A|U|176TB7|1|A|A|18s35
6TB7|1|A|U|176TB7|1|A|A|44cWW
6TB7|1|A|U|176TB7|1|A|G|16s53
6TB7|1|A|U|176TB7|1|A|U|170BPh
6TB7|1|A|U|216TB7|1|A|A|40cWW
6TB7|1|A|U|216TB7|1|A|G|20s53
6TB7|1|A|U|216TB7|1|A|U|210BPh
6TB7|1|A|U|216TB7|1|A|U|22s35
6TB7|1|A|U|226TB7|1|A|A|39cWW
6TB7|1|A|U|226TB7|1|A|A|40s55
6TB7|1|A|U|226TB7|1|A|G|23s35
6TB7|1|A|U|226TB7|1|A|U|21s53
6TB7|1|A|U|226TB7|1|A|U|220BPh
6TB7|1|A|U|46TB7|1|A|A|49cWW
6TB7|1|A|U|46TB7|1|A|C|3s53
6TB7|1|A|U|46TB7|1|A|G|50s55
6TB7|1|A|U|46TB7|1|A|U|40BPh
6TB7|1|A|U|46TB7|1|A|U|5s35
6TB7|1|A|U|416TB7|1|A|A|40s53
6TB7|1|A|U|416TB7|1|A|C|42s35
6TB7|1|A|U|416TB7|1|A|G|20cWW
6TB7|1|A|U|416TB7|1|A|U|410BPh
6TB7|1|A|U|436TB7|1|A|A|18cWW
6TB7|1|A|U|436TB7|1|A|A|44s35
6TB7|1|A|U|436TB7|1|A|C|42s53
6TB7|1|A|U|436TB7|1|A|G|19s55
6TB7|1|A|U|436TB7|1|A|U|430BPh
6TB7|1|A|U|466TB7|1|A|A|7cWW
6TB7|1|A|U|466TB7|1|A|C|45ns53
6TB7|1|A|U|466TB7|1|A|G|16s55
6TB7|1|A|U|466TB7|1|A|G|47s35
6TB7|1|A|U|466TB7|1|A|U|460BPh
6TB7|1|A|U|56TB7|1|A|C|6s35
6TB7|1|A|U|56TB7|1|A|G|48cWW
6TB7|1|A|U|56TB7|1|A|U|4s53
6TB7|1|A|U|56TB7|1|A|U|50BPh


Base-PairsCount (23)Relative Frequency
cWW210.913
cHS10.043
tHS10.043
Base-PhosphateCount (45)Relative Frequency
3BPh10.022
7BPh10.022
9BPh10.022
0BPh420.933
Base-StackingCount (29)Relative Frequency
s3310.034
s53130.448
s55150.517

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)