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As of 5-Aug-2020 number of released structures: 10886
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NDB ID: 6X5M  PDB ID: 6X5M 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
6X5M|1|A|A|106X5M|1|A|A|11s53
6X5M|1|A|A|106X5M|1|A|A|9s33
6X5M|1|A|A|106X5M|1|R|U|28ncHW
6X5M|1|A|A|106X5M|1|R|U|29s35
6X5M|1|A|A|106X5M|1|R|U|6ncWW
6X5M|1|A|A|106X5M|1|R|U|7s55
6X5M|1|A|A|116X5M|1|A|A|10s35
6X5M|1|A|A|116X5M|1|A|A|12s55
6X5M|1|A|A|116X5M|1|R|U|27ncHW
6X5M|1|A|A|116X5M|1|R|U|28ns35
6X5M|1|A|A|116X5M|1|R|U|7ncWW
6X5M|1|A|A|116X5M|1|R|U|8s55
6X5M|1|A|A|126X5M|1|A|A|11s55
6X5M|1|A|A|126X5M|1|A|A|12n0BP
6X5M|1|A|A|126X5M|1|R|C|9ns35
6X5M|1|A|A|126X5M|1|R|G|25ns33
6X5M|1|A|A|126X5M|1|R|U|26cWW
6X5M|1|A|A|126X5M|1|R|U|27s55
6X5M|1|A|A|126X5M|1|R|U|8cHW
6X5M|1|A|A|46X5M|1|A|A|40BPh
6X5M|1|A|A|46X5M|1|A|A|5s35
6X5M|1|A|A|46X5M|1|A|C|3s53
6X5M|1|A|A|46X5M|1|R|G|37s55
6X5M|1|A|A|46X5M|1|R|U|36cWW
6X5M|1|A|A|56X5M|1|A|A|4s53
6X5M|1|A|A|56X5M|1|A|A|50BPh
6X5M|1|A|A|56X5M|1|A|A|6s35
6X5M|1|A|A|56X5M|1|R|U|36s55
6X5M|1|A|A|66X5M|1|A|A|5s53
6X5M|1|A|A|66X5M|1|A|A|60BPh
6X5M|1|A|A|66X5M|1|A|A|7s35
6X5M|1|A|A|66X5M|1|R|C|35n2BP
6X5M|1|A|A|76X5M|1|A|A|6s53
6X5M|1|A|A|76X5M|1|A|A|70BPh
6X5M|1|A|A|76X5M|1|R|C|34ncSS
6X5M|1|A|A|76X5M|1|R|G|3
6X5M|1|A|A|76X5M|1|R|U|4ns35
6X5M|1|A|A|86X5M|1|A|A|9s55
6X5M|1|A|A|86X5M|1|R|C|33s35
6X5M|1|A|A|86X5M|1|R|U|30ncHW
6X5M|1|A|A|86X5M|1|R|U|32
6X5M|1|A|A|86X5M|1|R|U|4ncWW
6X5M|1|A|A|86X5M|1|R|U|5s55
6X5M|1|A|A|96X5M|1|A|A|10s33
6X5M|1|A|A|96X5M|1|A|A|8s55
6X5M|1|A|A|96X5M|1|R|U|29cWW
6X5M|1|A|A|96X5M|1|R|U|30s55
6X5M|1|A|A|96X5M|1|R|U|5cHW
6X5M|1|A|A|96X5M|1|R|U|6ns35
6X5M|1|A|C|36X5M|1|A|A|4s35
6X5M|1|A|C|36X5M|1|A|C|30BPh
6X5M|1|A|C|36X5M|1|A|G|2s53
6X5M|1|A|C|36X5M|1|R|G|37ncWW
6X5M|1|A|G|16X5M|1|A|G|10BPh
6X5M|1|A|G|16X5M|1|A|G|2s35
6X5M|1|A|G|16X5M|1|R|C|39cWW
6X5M|1|A|G|26X5M|1|A|C|3s35
6X5M|1|A|G|26X5M|1|A|G|1s53
6X5M|1|A|G|26X5M|1|A|G|20BPh
6X5M|1|A|G|26X5M|1|R|C|38cWW
6X5M|1|A|G|26X5M|1|R|C|39s55
6X5M|1|R|A|156X5M|1|R|A|150BPh
6X5M|1|R|A|166X5M|1|R|A|15n0BP
6X5M|1|R|A|166X5M|1|R|A|16n0BP
6X5M|1|R|A|166X5M|1|R|A|19ntSW
6X5M|1|R|A|166X5M|1|R|G|14s33
6X5M|1|R|A|176X5M|1|R|A|170BPh
6X5M|1|R|A|196X5M|1|R|A|16ntWS
6X5M|1|R|A|196X5M|1|R|A|190BPh
6X5M|1|R|A|196X5M|1|R|C|18s53
6X5M|1|R|A|196X5M|1|R|C|20s35
6X5M|1|R|A|226X5M|1|R|A|220BPh
6X5M|1|R|A|226X5M|1|R|A|23s35
6X5M|1|R|A|226X5M|1|R|C|13ns55
6X5M|1|R|A|226X5M|1|R|G|21s53
6X5M|1|R|A|226X5M|1|R|U|12cWW
6X5M|1|R|A|236X5M|1|R|A|22s53
6X5M|1|R|A|236X5M|1|R|A|230BPh
6X5M|1|R|A|236X5M|1|R|G|24s35
6X5M|1|R|A|236X5M|1|R|U|11cWW
6X5M|1|R|A|236X5M|1|R|U|12ns55
6X5M|1|R|A|316X5M|1|R|C|330BPh
6X5M|1|R|C|106X5M|1|R|C|100BPh
6X5M|1|R|C|106X5M|1|R|C|9s53
6X5M|1|R|C|106X5M|1|R|G|24cWW
6X5M|1|R|C|106X5M|1|R|G|25s55
6X5M|1|R|C|106X5M|1|R|U|11s35
6X5M|1|R|C|136X5M|1|R|A|22ns55
6X5M|1|R|C|136X5M|1|R|C|130BPh
6X5M|1|R|C|136X5M|1|R|G|14s35
6X5M|1|R|C|136X5M|1|R|G|21cWW
6X5M|1|R|C|136X5M|1|R|U|12s53
6X5M|1|R|C|186X5M|1|R|A|178BPh
6X5M|1|R|C|186X5M|1|R|A|19s35
6X5M|1|R|C|186X5M|1|R|C|180BPh
6X5M|1|R|C|206X5M|1|R|A|19s53
6X5M|1|R|C|206X5M|1|R|C|200BPh
6X5M|1|R|C|206X5M|1|R|G|14cWW
6X5M|1|R|C|206X5M|1|R|G|21s35
6X5M|1|R|C|336X5M|1|A|A|8s53
6X5M|1|R|C|336X5M|1|R|C|330BPh
6X5M|1|R|C|336X5M|1|R|C|34s35
6X5M|1|R|C|336X5M|1|R|G|3cWH
6X5M|1|R|C|346X5M|1|A|A|7ncSS
6X5M|1|R|C|346X5M|1|R|C|33s53
6X5M|1|R|C|346X5M|1|R|C|340BPh
6X5M|1|R|C|346X5M|1|R|C|35s35
6X5M|1|R|C|346X5M|1|R|G|2cWW
6X5M|1|R|C|356X5M|1|R|C|34s53
6X5M|1|R|C|356X5M|1|R|C|35n0BP
6X5M|1|R|C|356X5M|1|R|G|1cWW
6X5M|1|R|C|356X5M|1|R|G|2s55
6X5M|1|R|C|386X5M|1|A|G|2cWW
6X5M|1|R|C|386X5M|1|R|C|380BPh
6X5M|1|R|C|386X5M|1|R|C|39s35
6X5M|1|R|C|386X5M|1|R|G|37s53
6X5M|1|R|C|396X5M|1|A|G|1cWW
6X5M|1|R|C|396X5M|1|A|G|2s55
6X5M|1|R|C|396X5M|1|R|C|38s53
6X5M|1|R|C|396X5M|1|R|C|390BPh
6X5M|1|R|C|96X5M|1|A|A|12ns53
6X5M|1|R|C|96X5M|1|R|C|10s35
6X5M|1|R|C|96X5M|1|R|C|90BPh
6X5M|1|R|C|96X5M|1|R|G|25cWW
6X5M|1|R|C|96X5M|1|R|U|8s53
6X5M|1|R|G|16X5M|1|R|C|35cWW
6X5M|1|R|G|16X5M|1|R|G|2s35
6X5M|1|R|G|146X5M|1|R|A|16s33
6X5M|1|R|G|146X5M|1|R|C|13s53
6X5M|1|R|G|146X5M|1|R|C|20cWW
6X5M|1|R|G|146X5M|1|R|G|140BPh
6X5M|1|R|G|146X5M|1|R|G|21s55
6X5M|1|R|G|26X5M|1|R|C|34cWW
6X5M|1|R|G|26X5M|1|R|C|35s55
6X5M|1|R|G|26X5M|1|R|G|1s53
6X5M|1|R|G|26X5M|1|R|G|20BPh
6X5M|1|R|G|26X5M|1|R|G|3s33
6X5M|1|R|G|216X5M|1|R|A|22s35
6X5M|1|R|G|216X5M|1|R|C|13cWW
6X5M|1|R|G|216X5M|1|R|C|20s53
6X5M|1|R|G|216X5M|1|R|G|14s55
6X5M|1|R|G|216X5M|1|R|G|210BPh
6X5M|1|R|G|246X5M|1|R|A|23s53
6X5M|1|R|G|246X5M|1|R|C|10cWW
6X5M|1|R|G|246X5M|1|R|G|25s35
6X5M|1|R|G|246X5M|1|R|U|11s55
6X5M|1|R|G|256X5M|1|A|A|12ns33
6X5M|1|R|G|256X5M|1|R|C|10s55
6X5M|1|R|G|256X5M|1|R|C|9cWW
6X5M|1|R|G|256X5M|1|R|G|24s53
6X5M|1|R|G|256X5M|1|R|G|250BPh
6X5M|1|R|G|256X5M|1|R|U|26s35
6X5M|1|R|G|256X5M|1|R|U|8
6X5M|1|R|G|36X5M|1|R|C|33cHW
6X5M|1|R|G|36X5M|1|R|G|2s33
6X5M|1|R|G|36X5M|1|R|G|3n1BP
6X5M|1|R|G|36X5M|1|R|U|4s55
6X5M|1|R|G|376X5M|1|A|A|4s55
6X5M|1|R|G|376X5M|1|A|C|3ncWW
6X5M|1|R|G|376X5M|1|R|C|38s35
6X5M|1|R|G|376X5M|1|R|G|37n0BP
6X5M|1|R|G|376X5M|1|R|U|36s53
6X5M|1|R|U|116X5M|1|R|A|23cWW
6X5M|1|R|U|116X5M|1|R|C|10s53
6X5M|1|R|U|116X5M|1|R|G|24s55
6X5M|1|R|U|116X5M|1|R|U|110BPh
6X5M|1|R|U|116X5M|1|R|U|12s35
6X5M|1|R|U|126X5M|1|R|A|22cWW
6X5M|1|R|U|126X5M|1|R|A|23ns55
6X5M|1|R|U|126X5M|1|R|C|13s35
6X5M|1|R|U|126X5M|1|R|U|11s53
6X5M|1|R|U|126X5M|1|R|U|120BPh
6X5M|1|R|U|266X5M|1|A|A|12cWW
6X5M|1|R|U|266X5M|1|R|G|25s53
6X5M|1|R|U|266X5M|1|R|U|260BPh
6X5M|1|R|U|266X5M|1|R|U|27s35
6X5M|1|R|U|276X5M|1|A|A|11ncWH
6X5M|1|R|U|276X5M|1|A|A|12s55
6X5M|1|R|U|276X5M|1|R|U|26s53
6X5M|1|R|U|276X5M|1|R|U|27n0BP
6X5M|1|R|U|276X5M|1|R|U|28s35
6X5M|1|R|U|286X5M|1|A|A|10ncWH
6X5M|1|R|U|286X5M|1|A|A|11ns53
6X5M|1|R|U|286X5M|1|R|U|27s53
6X5M|1|R|U|286X5M|1|R|U|280BPh
6X5M|1|R|U|286X5M|1|R|U|29s35
6X5M|1|R|U|296X5M|1|A|A|10s53
6X5M|1|R|U|296X5M|1|A|A|9cWW
6X5M|1|R|U|296X5M|1|R|U|28s53
6X5M|1|R|U|296X5M|1|R|U|290BPh
6X5M|1|R|U|296X5M|1|R|U|30s35
6X5M|1|R|U|306X5M|1|A|A|8ncWH
6X5M|1|R|U|306X5M|1|A|A|9s55
6X5M|1|R|U|306X5M|1|R|U|29s53
6X5M|1|R|U|306X5M|1|R|U|30n0BP
6X5M|1|R|U|326X5M|1|A|A|8
6X5M|1|R|U|366X5M|1|A|A|4cWW
6X5M|1|R|U|366X5M|1|A|A|5s55
6X5M|1|R|U|366X5M|1|R|C|35
6X5M|1|R|U|366X5M|1|R|G|37s35
6X5M|1|R|U|366X5M|1|R|U|360BPh
6X5M|1|R|U|46X5M|1|A|A|7ns53
6X5M|1|R|U|46X5M|1|A|A|8ncWW
6X5M|1|R|U|46X5M|1|R|G|3s55
6X5M|1|R|U|46X5M|1|R|U|40BPh
6X5M|1|R|U|46X5M|1|R|U|5s35
6X5M|1|R|U|56X5M|1|A|A|8s55
6X5M|1|R|U|56X5M|1|A|A|9cWH
6X5M|1|R|U|56X5M|1|R|U|4s53
6X5M|1|R|U|56X5M|1|R|U|50BPh
6X5M|1|R|U|56X5M|1|R|U|6s35
6X5M|1|R|U|66X5M|1|A|A|10ncWW
6X5M|1|R|U|66X5M|1|A|A|9ns53
6X5M|1|R|U|66X5M|1|R|U|5s53
6X5M|1|R|U|66X5M|1|R|U|6n0BP
6X5M|1|R|U|66X5M|1|R|U|7s35
6X5M|1|R|U|76X5M|1|A|A|10s55
6X5M|1|R|U|76X5M|1|A|A|11ncWW
6X5M|1|R|U|76X5M|1|R|U|6s53
6X5M|1|R|U|76X5M|1|R|U|8s35
6X5M|1|R|U|86X5M|1|A|A|11s55
6X5M|1|R|U|86X5M|1|A|A|12cWH
6X5M|1|R|U|86X5M|1|R|C|9s35
6X5M|1|R|U|86X5M|1|R|G|25
6X5M|1|R|U|86X5M|1|R|U|7s53
6X5M|1|R|U|86X5M|1|R|U|80BPh
6X5M|1|a|A|106X5M|1|a|A|11s55
6X5M|1|a|A|106X5M|1|a|A|9s33
6X5M|1|a|A|106X5M|1|r|U|28ncHW
6X5M|1|a|A|106X5M|1|r|U|29s35
6X5M|1|a|A|106X5M|1|r|U|6ncWW
6X5M|1|a|A|106X5M|1|r|U|7s55
6X5M|1|a|A|116X5M|1|a|A|10s55
6X5M|1|a|A|116X5M|1|a|A|12s35
6X5M|1|a|A|116X5M|1|r|U|27cWW
6X5M|1|a|A|116X5M|1|r|U|28s55
6X5M|1|a|A|116X5M|1|r|U|7cHW
6X5M|1|a|A|116X5M|1|r|U|8ns35
6X5M|1|a|A|126X5M|1|a|A|11s53
6X5M|1|a|A|126X5M|1|a|A|12n0BP
6X5M|1|a|A|126X5M|1|r|C|9ns35
6X5M|1|a|A|126X5M|1|r|G|25ns33
6X5M|1|a|A|126X5M|1|r|U|26cWW
6X5M|1|a|A|126X5M|1|r|U|27s55
6X5M|1|a|A|126X5M|1|r|U|8cHW
6X5M|1|a|A|46X5M|1|a|A|42BPh
6X5M|1|a|A|46X5M|1|a|A|5s55
6X5M|1|a|A|46X5M|1|a|C|3s33
6X5M|1|a|A|46X5M|1|r|U|36ncHW
6X5M|1|a|A|56X5M|1|a|A|4s55
6X5M|1|a|A|56X5M|1|a|A|5n0BP
6X5M|1|a|A|56X5M|1|a|A|6s35
6X5M|1|a|A|56X5M|1|r|C|35
6X5M|1|a|A|56X5M|1|r|U|36s55
6X5M|1|a|A|66X5M|1|a|A|5s53
6X5M|1|a|A|66X5M|1|a|A|60BPh
6X5M|1|a|A|66X5M|1|a|A|7s35
6X5M|1|a|A|66X5M|1|r|C|35
6X5M|1|a|A|76X5M|1|a|A|6s53
6X5M|1|a|A|76X5M|1|a|A|70BPh
6X5M|1|a|A|76X5M|1|r|C|33cSS
6X5M|1|a|A|76X5M|1|r|C|34ncSS
6X5M|1|a|A|76X5M|1|r|G|3tSS
6X5M|1|a|A|76X5M|1|r|U|4ns33
6X5M|1|a|A|86X5M|1|a|A|9s35
6X5M|1|a|A|86X5M|1|r|C|33s55
6X5M|1|a|A|86X5M|1|r|U|30cWW
6X5M|1|a|A|86X5M|1|r|U|32
6X5M|1|a|A|96X5M|1|a|A|10s33
6X5M|1|a|A|96X5M|1|a|A|8s53
6X5M|1|a|A|96X5M|1|r|U|29cWW
6X5M|1|a|A|96X5M|1|r|U|30s55
6X5M|1|a|A|96X5M|1|r|U|5ncHW
6X5M|1|a|A|96X5M|1|r|U|6s35
6X5M|1|a|C|36X5M|1|a|A|4s33
6X5M|1|a|C|36X5M|1|a|C|30BPh
6X5M|1|a|C|36X5M|1|a|G|2s53
6X5M|1|a|C|36X5M|1|r|G|37ncWH
6X5M|1|a|G|16X5M|1|a|G|1n0BP
6X5M|1|a|G|16X5M|1|a|G|2s35
6X5M|1|a|G|16X5M|1|r|C|39cWW
6X5M|1|a|G|26X5M|1|a|C|3s35
6X5M|1|a|G|26X5M|1|a|G|1s53
6X5M|1|a|G|26X5M|1|a|G|20BPh
6X5M|1|a|G|26X5M|1|r|C|39s55
6X5M|1|r|A|156X5M|1|r|A|15n0BP
6X5M|1|r|A|166X5M|1|r|A|15n7BP
6X5M|1|r|A|166X5M|1|r|A|16n0BP
6X5M|1|r|A|166X5M|1|r|A|19tSW
6X5M|1|r|A|166X5M|1|r|G|14s33
6X5M|1|r|A|176X5M|1|r|A|170BPh
6X5M|1|r|A|196X5M|1|r|A|16tWS
6X5M|1|r|A|196X5M|1|r|A|190BPh
6X5M|1|r|A|196X5M|1|r|C|18s53
6X5M|1|r|A|196X5M|1|r|C|20s35
6X5M|1|r|A|226X5M|1|r|A|220BPh
6X5M|1|r|A|226X5M|1|r|A|23s35
6X5M|1|r|A|226X5M|1|r|C|13ns55
6X5M|1|r|A|226X5M|1|r|G|21s53
6X5M|1|r|A|226X5M|1|r|U|12cWW
6X5M|1|r|A|236X5M|1|r|A|22s53
6X5M|1|r|A|236X5M|1|r|A|230BPh
6X5M|1|r|A|236X5M|1|r|G|24s35
6X5M|1|r|A|236X5M|1|r|U|11cWW
6X5M|1|r|A|236X5M|1|r|U|12ns55
6X5M|1|r|C|106X5M|1|r|C|100BPh
6X5M|1|r|C|106X5M|1|r|C|9s53
6X5M|1|r|C|106X5M|1|r|G|24cWW
6X5M|1|r|C|106X5M|1|r|G|25s55
6X5M|1|r|C|106X5M|1|r|U|11s35
6X5M|1|r|C|136X5M|1|r|A|22ns55
6X5M|1|r|C|136X5M|1|r|C|130BPh
6X5M|1|r|C|136X5M|1|r|G|14ns35
6X5M|1|r|C|136X5M|1|r|G|21cWW
6X5M|1|r|C|136X5M|1|r|U|12s53
6X5M|1|r|C|186X5M|1|r|A|178BPh
6X5M|1|r|C|186X5M|1|r|A|19s35
6X5M|1|r|C|186X5M|1|r|C|180BPh
6X5M|1|r|C|206X5M|1|r|A|19s53
6X5M|1|r|C|206X5M|1|r|C|200BPh
6X5M|1|r|C|206X5M|1|r|G|14cWW
6X5M|1|r|C|206X5M|1|r|G|21ns35
6X5M|1|r|C|336X5M|1|a|A|7cSS
6X5M|1|r|C|336X5M|1|a|A|8s55
6X5M|1|r|C|336X5M|1|r|C|330BPh
6X5M|1|r|C|336X5M|1|r|C|34ns35
6X5M|1|r|C|336X5M|1|r|G|3cWW
6X5M|1|r|C|346X5M|1|a|A|7ncSS
6X5M|1|r|C|346X5M|1|r|C|33ns53
6X5M|1|r|C|346X5M|1|r|C|340BPh
6X5M|1|r|C|346X5M|1|r|C|35s35
6X5M|1|r|C|346X5M|1|r|G|2cWW
6X5M|1|r|C|346X5M|1|r|G|3s55
6X5M|1|r|C|356X5M|1|r|C|34s53
6X5M|1|r|C|356X5M|1|r|C|35n0BP
6X5M|1|r|C|356X5M|1|r|G|1cWW
6X5M|1|r|C|356X5M|1|r|G|2s55
6X5M|1|r|C|386X5M|1|r|C|38
6X5M|1|r|C|386X5M|1|r|C|39s55
6X5M|1|r|C|386X5M|1|r|G|37s35
6X5M|1|r|C|396X5M|1|a|G|1cWW
6X5M|1|r|C|396X5M|1|a|G|2s55
6X5M|1|r|C|396X5M|1|r|C|38s55
6X5M|1|r|C|396X5M|1|r|C|39n0BP
6X5M|1|r|C|96X5M|1|a|A|12ns53
6X5M|1|r|C|96X5M|1|r|C|10s35
6X5M|1|r|C|96X5M|1|r|C|90BPh
6X5M|1|r|C|96X5M|1|r|G|25cWW
6X5M|1|r|C|96X5M|1|r|U|8s53
6X5M|1|r|G|16X5M|1|r|C|35cWW
6X5M|1|r|G|16X5M|1|r|G|1n0BP
6X5M|1|r|G|16X5M|1|r|G|2s35
6X5M|1|r|G|146X5M|1|r|A|16s33
6X5M|1|r|G|146X5M|1|r|C|13ns53
6X5M|1|r|G|146X5M|1|r|C|20cWW
6X5M|1|r|G|146X5M|1|r|G|140BPh
6X5M|1|r|G|146X5M|1|r|G|21s55
6X5M|1|r|G|26X5M|1|r|C|34cWW
6X5M|1|r|G|26X5M|1|r|C|35s55
6X5M|1|r|G|26X5M|1|r|G|1s53
6X5M|1|r|G|26X5M|1|r|G|20BPh
6X5M|1|r|G|26X5M|1|r|G|3s35
6X5M|1|r|G|216X5M|1|r|A|22s35
6X5M|1|r|G|216X5M|1|r|C|13cWW
6X5M|1|r|G|216X5M|1|r|C|20ns53
6X5M|1|r|G|216X5M|1|r|G|14s55
6X5M|1|r|G|216X5M|1|r|G|21n0BP
6X5M|1|r|G|246X5M|1|r|A|23s53
6X5M|1|r|G|246X5M|1|r|C|10cWW
6X5M|1|r|G|246X5M|1|r|G|25s35
6X5M|1|r|G|246X5M|1|r|U|11s55
6X5M|1|r|G|256X5M|1|a|A|12ns33
6X5M|1|r|G|256X5M|1|r|C|10s55
6X5M|1|r|G|256X5M|1|r|C|9cWW
6X5M|1|r|G|256X5M|1|r|G|24s53
6X5M|1|r|G|256X5M|1|r|G|250BPh
6X5M|1|r|G|256X5M|1|r|U|26s35
6X5M|1|r|G|36X5M|1|a|A|7tSS
6X5M|1|r|G|36X5M|1|r|C|33cWW
6X5M|1|r|G|36X5M|1|r|C|34s55
6X5M|1|r|G|36X5M|1|r|G|2s53
6X5M|1|r|G|36X5M|1|r|U|4s33
6X5M|1|r|G|376X5M|1|a|C|3ncHW
6X5M|1|r|G|376X5M|1|r|C|38s53
6X5M|1|r|G|376X5M|1|r|U|36s33
6X5M|1|r|U|116X5M|1|r|A|23cWW
6X5M|1|r|U|116X5M|1|r|C|10s53
6X5M|1|r|U|116X5M|1|r|G|24s55
6X5M|1|r|U|116X5M|1|r|U|110BPh
6X5M|1|r|U|116X5M|1|r|U|12s35
6X5M|1|r|U|126X5M|1|r|A|22cWW
6X5M|1|r|U|126X5M|1|r|A|23ns55
6X5M|1|r|U|126X5M|1|r|C|13s35
6X5M|1|r|U|126X5M|1|r|U|11s53
6X5M|1|r|U|126X5M|1|r|U|120BPh
6X5M|1|r|U|266X5M|1|a|A|12cWW
6X5M|1|r|U|266X5M|1|r|G|25s53
6X5M|1|r|U|266X5M|1|r|U|260BPh
6X5M|1|r|U|266X5M|1|r|U|27s35
6X5M|1|r|U|276X5M|1|a|A|11cWW
6X5M|1|r|U|276X5M|1|a|A|12s55
6X5M|1|r|U|276X5M|1|r|U|26s53
6X5M|1|r|U|276X5M|1|r|U|27n0BP
6X5M|1|r|U|276X5M|1|r|U|28s35
6X5M|1|r|U|286X5M|1|a|A|10ncWH
6X5M|1|r|U|286X5M|1|a|A|11s55
6X5M|1|r|U|286X5M|1|r|U|27s53
6X5M|1|r|U|286X5M|1|r|U|280BPh
6X5M|1|r|U|286X5M|1|r|U|29s35
6X5M|1|r|U|296X5M|1|a|A|10s53
6X5M|1|r|U|296X5M|1|a|A|9cWW
6X5M|1|r|U|296X5M|1|r|U|28s53
6X5M|1|r|U|296X5M|1|r|U|290BPh
6X5M|1|r|U|296X5M|1|r|U|30s35
6X5M|1|r|U|306X5M|1|a|A|8cWW
6X5M|1|r|U|306X5M|1|a|A|9s55
6X5M|1|r|U|306X5M|1|r|U|29s53
6X5M|1|r|U|306X5M|1|r|U|30n0BP
6X5M|1|r|U|326X5M|1|r|U|30
6X5M|1|r|U|366X5M|1|a|A|4ncWH
6X5M|1|r|U|366X5M|1|a|A|5s55
6X5M|1|r|U|366X5M|1|r|G|37s33
6X5M|1|r|U|366X5M|1|r|U|360BPh
6X5M|1|r|U|46X5M|1|a|A|7ns33
6X5M|1|r|U|46X5M|1|r|G|3s33
6X5M|1|r|U|46X5M|1|r|U|4
6X5M|1|r|U|46X5M|1|r|U|5s55
6X5M|1|r|U|56X5M|1|a|A|9ncWH
6X5M|1|r|U|56X5M|1|r|U|4s55
6X5M|1|r|U|56X5M|1|r|U|50BPh
6X5M|1|r|U|56X5M|1|r|U|6s35
6X5M|1|r|U|66X5M|1|a|A|10ncWW
6X5M|1|r|U|66X5M|1|a|A|9s53
6X5M|1|r|U|66X5M|1|r|U|5s53
6X5M|1|r|U|66X5M|1|r|U|6n0BP
6X5M|1|r|U|66X5M|1|r|U|7s35
6X5M|1|r|U|76X5M|1|a|A|10s55
6X5M|1|r|U|76X5M|1|a|A|11cWH
6X5M|1|r|U|76X5M|1|r|U|6s53
6X5M|1|r|U|76X5M|1|r|U|8s35
6X5M|1|r|U|86X5M|1|a|A|11ns53
6X5M|1|r|U|86X5M|1|a|A|12cWH
6X5M|1|r|U|86X5M|1|r|C|9s35
6X5M|1|r|U|86X5M|1|r|U|7s53
6X5M|1|r|U|86X5M|1|r|U|80BPh


Base-PairsCount (23)Relative Frequency
cWW160.696
cWH40.174
tWS10.043
cSS10.043
tSS10.043
Base-PhosphateCount (37)Relative Frequency
2BPh10.027
8BPh10.027
0BPh350.946
Base-StackingCount (29)Relative Frequency
s3330.103
s53100.345
s55160.552

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)