A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 3-Mar-2021 number of released structures: 11234
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NDB ID: 7B4Z  PDB ID: 7B4Z 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12A_DA2:DT19_B0.116-0.021-0.044.47-12.716-0.579
11A_DC1:DG20_B0.253-0.0930.2695.509-9.147-1.484
13A_DC3:DG18_B0.478-0.1430.0772.427-9.444-0.091
15A_DC5:DG16_B0.321-0.0680.317-12.623-4.136-0.707
16A_DC6:DG15_B0.246-0.0880.137-6.42-1.3140.508
18A_DC8:DG13_B0.514-0.1510.158-1.097-4.031-0.318
14A_DG4:DC17_B-0.37-0.113-0.062-10.418-11.692-0.298
17A_DG7:DC14_B-0.397-0.1160.1183.03-2.389-0.7
110A_DG10:DC11_B-0.279-0.0860.177-6.676-8.663-1.008
19A_DT9:DA12_B-0.059-0.031-0.121-2.41-12.1010.256

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.