A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Apr-2021 number of released structures: 11277
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NDB ID: 7BFX  PDB ID: 7BFX 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11A_DA1:DT20_A-0.506-0.132-0.17-2.428-2.6795.273
14A_DA4:DT17_A0.352-0.1910.7432.771-15.4952.602
15A_DA5:DT16_A0.2820.0340.327-8.0812.5414.819
13A_DC3:DG18_A0.408-0.2490.3747.761-31.398-2.66
17A_DC7:DG14_A-0.094-0.091-0.407-5.227-14.1954.799
18A_DC8:DG13_A-0.6060.0360.1415.5021.4860.33
12A_DG2:DC19_A0.614-0.1470.477-0.063-18.071-0.053
16A_DT6:DA15_A-0.1640.0150.228-13.878-9.291-0.342

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.