A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 12-Aug-2022 number of released structures: 12231
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NDB ID: 7EI9  PDB ID: 7EI9 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
15A_A8:G15_B-6.696-5.1190.695-20.4670.444-14.302
16A_A9:G14_B-7.318-4.61-0.1324.711-5.5030.924
113A_A16:G7_B-6.895-4.5380.464-11.31425.0018.097
13A_C3:G17_B0.659-0.139-0.1072.9853.9070.99
17A_C10:G13_B-0.3990.125-0.17612.185-5.9712.311
18A_C11:G12_B-0.355-0.3220.0069.7190.718-1.173
115A_C18:G2_B-0.2330.079-0.4114.505-3.9646.965
116A_C19:G1_B-0.0670.097-0.2297.876-4.2473.318
11A_G1:C19_B0.23-0.174-0.337-6.499-5.622-2.994
12A_G2:C18_B-0.233-0.124-0.446-0.875-5.5332.555
14A_G7:A16_B6.974-3.8130.75122.99218.1435.91
19A_G12:C11_B-0.125-0.332-0.391-2.23-6.109-1.003
110A_G13:C10_B-0.229-0.1660.146-7.842-5.4996.094
111A_G14:A9_B7.506-3.6910.133-9.513-13.5137.991
112A_G15:A8_B7.036-4.9360.27524.2745.012-12.475
114A_G17:C3_B-0.278-0.411-0.157-3.0533.53-4.622

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.