7EI9: Base Pair Morphology Step Parameters

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As of 12-Aug-2022 number of released structures: 12231

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NDB ID: 7EI9 PDB ID: 7EI9

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	4	AA_A8A9:G14G15_BB	0.047	-0.309	2.995	-13.48	7.938	27.818	-1.876	-2.314	2.529	15.095	25.633	31.839
1	5	AA_A9C10:G13G14_BB	0.105	-0.663	3.14	-5.589	3.271	64.854	-0.745	-0.319	3.09	3.042	5.198	65.141
1	6	AA_C10C11:G12G13_BB	-0.274	-2.141	3.262	-1.733	7.005	30.658	-5.161	0.205	2.729	13.023	3.221	31.476
1	7	AA_C11G12:C11G12_BB	0.25	-1.918	3.314	3.658	10.947	31.744	-4.949	0.119	2.544	19.236	-6.428	33.727
1	13	AA_C18C19:G1G2_BB	0.362	-1.746	3.171	-0.782	4.988	29.099	-4.407	-0.864	2.829	9.833	1.541	29.524
1	1	AA_G1G2:C18C19_BB	-0.476	-2.104	3.312	-3.412	1.673	26.337	-5.011	0.137	3.209	3.648	7.439	26.605
1	2	AA_G2C3:G17C18_BB	0.264	-2.173	3.275	-2.934	2.814	36.253	-3.851	-0.818	3.074	4.505	4.697	36.473
1	3	AA_G7A8:G15A16_BB	-1.689	-1.435	4.466	-8.384	-11.847	-8.192	12.835	-11.407	0.335	49.556	-35.072	-16.655
1	8	AA_G12G13:C10C11_BB	0.625	-1.954	3.198	-3.848	6.891	31.92	-4.524	-1.701	2.639	12.297	6.867	32.856
1	9	AA_G13G14:A9C10_BB	-0.055	-0.697	3.485	7.009	4.019	65.717	-0.81	0.349	3.421	3.689	-6.433	66.157
1	10	AA_G14G15:A8A9_BB	-0.255	-0.141	2.783	12.643	1.986	30.867	-0.522	2.203	2.478	3.546	-22.576	33.355
1	11	AA_G15A16:G7A8_BB	1.625	-1.629	4.246	7.909	-4.864	-7.33	14.217	18.144	0.881	27.132	44.114	-11.824
1	12	AA_G17C18:G2C3_BB	0.24	-2.143	3.217	3.989	4.88	30.685	-4.836	0.262	2.858	9.101	-7.44	31.311

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.