A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-May-2022 number of released structures: 12082
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NDB ID: 7EOJ  PDB ID: 7EOJ 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
13A_C3:G47_A0.262-0.086-0.2027.211-15.5032.304
15A_C5:G45_A0.227-0.0890.388-15.562-12.774-0.239
16A_C7:G44_A0.381-0.116-0.0630.219-1.3621.934
110A_C11:G39_A0.118-0.062-0.24813.954-16.7723.044
112A_C13:G37_A-0.012-0.0560.203-8.21-17.0321.598
115A_C16:G27_A0.265-0.2670.2121.473-16.0292.055
117A_C18:G25_A0.13-0.599-0.266-5.2784.214-6.735
118A_C19:G24_A0.75-0.737-0.17710.0871.615-7.201
12A_G2:C48_A-0.418-0.1440.0946.617-18.4930.929
14A_G4:C46_A-0.193-0.147-0.11-11.692-19.9991.663
18A_G9:C33_A-0.0525.4030.35922.97124.164124.426
19A_G10:U40_A-2.666-0.6120.1768.059-3.643-5.466
111A_G12:C38_A-0.206-0.215-0.108-6.345-15.41-0.231
114A_G15:C28_A-0.232-0.0940.322.693-8.7954.617
116A_G17:C26_A-1.005-0.0860.179-9.251-14.2983.91
11A_GDP1:C49_A-0.223-0.1050.159-0.235-4.555-2.914
17A_U8:U42_A2.312-1.8420.167-1.333-14.8989.733
113A_U14:A36_A0.4710.0040.464-11.581-10.739-4.033
119A_U32:U35_A3.514-0.1870.14737.78219.952-91.799

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.