7ICN: Base Pair Morphology Parameters

A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Apr-2021 number of released structures: 11277

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NDB ID: PDE056 PDB ID: 7ICN

Base Pair Morphology Parameters

CSV Format

Model Number	Pair Number	Pair Name	Shear	Stretch	Stagger	Buckle	Propellor	Opening
1	2	T_DA3:DT5_P	0.53	-0.36	0.19	3.848	-8.376	7.923
1	1	T_DC2:DG6_P	0.586	-0.546	0.053	-6.281	-8.905	4.603
1	4	T_DC5:DG3_P	0.328	-0.418	0.213	-6.575	-4.619	-1.505
1	6	T_DG7:DC1_P	0.415	-0.073	0.527	12.167	-17.068	3.464
1	3	T_DT4:DA4_P	-0.631	-0.408	0.329	4.083	-10.818	6.845
1	5	T_DT6:DA2_P	0.037	-0.023	-0.197	-3.368	-13.186	-1.846

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.