A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 14-Apr-2021 number of released structures: 11277
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NDB ID: PDE056  PDB ID: 7ICN 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12T_DA3:DT5_P0.53-0.360.193.848-8.3767.923
11T_DC2:DG6_P0.586-0.5460.053-6.281-8.9054.603
14T_DC5:DG3_P0.328-0.4180.213-6.575-4.619-1.505
16T_DG7:DC1_P0.415-0.0730.52712.167-17.0683.464
13T_DT4:DA4_P-0.631-0.4080.3294.083-10.8186.845
15T_DT6:DA2_P0.037-0.023-0.197-3.368-13.186-1.846

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.