A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 9-Oct-2019 number of released structures: 10416
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NDB ID: PDE060  PDB ID: 7ICR 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
12TT_DA3DT4:DA4DT5_PP-0.107-0.7993.077-1.3815.88224.598-3.382-0.1212.81413.5463.18125.318
11TT_DC2DA3:DT5DG6_PP0.0161.0033.543-0.0654.78630.4650.854-0.0453.6549.0370.12330.83
14TT_DC5DT6:DA2DG3_PP-0.51-0.2883.4332.3962.02428.165-1.0741.6173.3514.142-4.90428.336
13TT_DT4DC5:DG3DA4_PP-0.159-0.0823.655-1.538.08343.488-0.9520.0523.58810.7932.04444.222
15TT_DT6DG7:DC1DA2_PP0.6060.9342.937-3.966.69525.9320.433-2.222.95814.518.58127.054

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.