A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 3-Mar-2021 number of released structures: 11234
Search for released structures

NDB ID: 7JJF  PDB ID: 7JJF 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
18AA_A57C58:G76G77_AA0.206-1.073.023-2.5872.49460.657-1.168-0.3182.9712.4672.55960.753
12AA_C49U50:A83G84_AA-0.326-1.8543.244-2.3057.98926.804-5.5530.1742.61116.7294.82828.041
14AA_C51C52:G81G82_AA-0.775-1.9333.3210.687.24831.816-4.6371.4922.80713.01-1.22132.617
15AA_C52U53:C80G81_AA-0.58-0.9963.56.81710.63752.386-1.7871.083.16411.854-7.59753.784
19AA_C58G59:A75G76_AA-2.798-1.2932.94-6.9766.70449.855-1.9482.8093.0937.8678.18650.726
11AA_G48C49:G84U85_AA-0.089-1.0792.9831.9925.05543.559-1.8720.2882.846.78-2.67143.88
13AA_U50C51:G82A83_AA0.642-1.5253.246-1.4165.7237.49-3.045-1.162.9658.8332.18737.934
16AA_U53U56:A78C80_AA0.301-0.8756.0683.271-4.59133.299-0.110.4786.132-7.941-5.65833.76
17AA_U56A57:G77A78_AA5.141-1.4013.539-1.968-2.858-11.5310.96321.5633.89613.824-9.519-12.039

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.