A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 17-Aug-2022 number of released structures: 12237
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NDB ID: 7KTK  PDB ID: 7KTK 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
16T_DA7:DT3_P0.207-0.117-0.0216.009-5.8381.346
11T_DC1:DG4_D0.169-0.1420.324-8.774-13.333-1.531
14T_DC4:DG1_D0.236-0.119-0.17312.7930.286-1.563
17T_DC8:DG2_P0.267-0.178-0.05915.542-16.877-0.607
12T_DG2:DC3_D-0.169-0.127-0.052-1.705-4.615-0.886
13T_DG3:DC2_D-0.167-0.1270.126-0.093-5.481-1.437
18T_DG9:DC1_P-0.14-0.1670.132-0.254-13.125-1.42
15T_DT6:DA4_P-0.046-1.019-0.177-14.1737.416-169.729

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.