7KTK: Base Pair Morphology Step Parameters

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As of 17-Aug-2022 number of released structures: 12237

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NDB ID: 7KTK PDB ID: 7KTK

Base Pair Morphology Step Parameters

CSV Format

Model Number	Step Number	Step Name	Shift	Slide	Rise	Tilt	Roll	Twist	X-Displacement	Y-Displacement	Helical Rise	Inclination	Tip	Helical Twist
1	5	TT_DA7DC8:DG2DT3_PP	-0.6	-0.715	3.376	-4.104	3.604	34.274	-1.769	0.357	3.333	6.068	6.91	34.694
1	1	TT_DC1DG2:DC3DG4_DD	0.277	0.638	3.178	3.929	5.348	36.07	0.289	0.094	3.248	8.547	-6.28	36.656
1	6	TT_DC8DG9:DC1DG2_PP	-0.646	-0.917	3.532	-5.21	10.409	37.457	-2.689	0.302	3.232	15.75	7.884	39.162
1	2	TT_DG2DG3:DC2DC3_DD	-0.457	-0.28	3.24	-4.22	4.432	35.973	-1.058	0.149	3.215	7.113	6.773	36.473
1	3	TT_DG3DC4:DG1DC2_DD	0.228	0.158	3.03	3.228	0.441	26.226	0.237	0.301	3.038	0.968	-7.079	26.424
1	4	TT_DT6DA7:DT3DA4_PP	-0.392	1.035	2.948	4.705	8.885	-73.501	-1.107	-0.193	2.842	-7.391	3.914	-74.089

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.