A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Oct-2021 number of released structures: 11721
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NDB ID: 7L4K  PDB ID: 7L4K 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
12B_DA2:DT17_C0.115-0.1820.43812.091-31.4431.431
13B_DA3:DT16_C0.445-0.0710.5185.806-27.8840.341
14B_DA4:DT15_C0.337-0.1280.3620.5-22.234.006
19B_DA10:DT9_C-0.598-0.0220.106-12.886-9.006-2.582
112B_DA13:DT6_C0.2410.03-0.156-0.057-8.816-1.758
115B_DA16:DT3_C-0.204-0.4630.00410.276-12.679-2.32
116B_DA17:DT2_C0.710.0210.506-1.25-18.711-0.569
17B_DC7:DG12_C0.842-0.176-0.61715.63-13.410.878
18B_DG8:DC11_C0.271-0.1610.16918.2587.8092.3
113B_DG14:DC5_C0.340.2010.1999.977-22.36710.328
114B_DG15:DC4_C-0.1040.0430.0753.748-16.26714.447
11B_DT1:DA18_C-0.1750.2420.555-17.42710.859.239
15B_DT5:DA14_C-0.195-0.0470.098-3.08-23.1423.681
16B_DT6:DA13_C-0.213-0.2010.077-0.753-13.4154.234
110B_DT11:DA8_C0.046-0.0160.105-5.439-17.358-3.807
111B_DT12:DA7_C-0.2110.0050.479-4.311-18.2488.363
117B_DT18:DA1_C-0.538-0.1460.336-7.348-14.94-17.237

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.