A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 30-Nov-2022 number of released structures: 12490
Search for released structures

NDB ID: 7LNF  PDB ID: 7LNF 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
11A_A5:U12_B-0.066-0.0650.0565.875-10.129-4.507
15A_A9:U8_B0.439-0.0760.0551.57-10.0186.073
16A_A10:U7_B-0.005-0.1360.0481.49-13.4394.743
12A_C6:G11_B0.163-0.128-0.0418.112-16.8010.856
17A_G11:C6_B-0.212-0.126-0.075-8.589-16.850.852
13A_U7:A10_B-0.106-0.1260.087-1.392-13.6823.61
14A_U8:A9_B-0.361-0.0350.0170.061-11.0868.226
18A_U12:A5_B0.077-0.0730.111-6.344-8.779-4.604

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.