A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 30-Nov-2022 number of released structures: 12490
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NDB ID: 7LNF  PDB ID: 7LNF 


Base Pair Morphology Step Parameters

CSV Format

Model NumberStep NumberStep NameShiftSlideRiseTiltRollTwistX-DisplacementY-DisplacementHelical RiseInclinationTipHelical Twist
11AA_A5C6:G11U12_BB0.436-1.5643.2050.8424.85931.764-3.649-0.6442.9498.811-1.52832.135
15AA_A9A10:U7U8_BB-0.046-1.1813.2541.4628.22628.522-3.9410.3812.80616.26-2.88929.696
16AA_A10G11:C6U7_BB0.284-1.7583.5343.17911.25930.577-5.0610.0432.74720.434-5.76932.688
12AA_C6U7:A10G11_BB-0.306-1.7543.524-3.28710.56630.266-5.045-0.0332.78719.4386.04732.18
17AA_G11U12:A5C6_BB-0.436-1.5693.213-1.4745.30132.056-3.6810.5352.949.5112.64532.513
13AA_U7U8:A9A10_BB0.107-1.1613.203-0.5079.00529.629-3.794-0.2912.73817.1160.96430.941
14AA_U8A9:U8A9_BB-0.056-1.5073.203-0.44716.95136.592-3.8990.0372.31225.3920.6740.208

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.