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As of 20-Oct-2021 number of released structures: 11724
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NDB ID: 7MLX  PDB ID: 7MLX 


Base Pair Morphology Parameters

CSV Format

Model NumberPair NumberPair NameShearStretchStaggerBucklePropellorOpening
18R_A9:U24_R0.03-0.0490.01-1.768-8.7670.504
19R_A10:U23_R0.06-0.1340.2046.995-10.897-1.588
123R_A37:U50_R0.021-0.1470.4543.588-0.8033.739
125R_A39:U47_R0.06-0.1440.1862.723-9.4232.212
127R_A42:A45_R3.079-3.6320.786-31.896-4.903-77.789
12R_C3:G30_R0.149-0.110.213-0.296-8.6470.011
119R_C33:G54_R0.205-0.1730.2792.39-12.42-1.257
122R_C36:G51_R0.181-0.2060.4530.862-12.479-1.21
124R_C38:G48_R0.206-0.1160.264-3.345-3.1311.044
116R_C64:G16_R0.261-0.1240.004-1.85-3.5142.568
11R_G2:U31_R-2.444-0.593-0.273-5.07-7.8370.294
13R_G4:C29_R-0.183-0.145-0.187-7.006-14.4310.396
14R_G5:C28_R-0.287-0.15-0.061-10.899-12.77-0.182
16R_G7:C26_R-0.204-0.082-0.048-7.098-13.612.319
110R_G11:C22_R-0.143-0.1620.042.437-15.806-0.1
112R_G13:G20_R-5.611-0.3440.0812.3646.589-112.766
118R_G32:U55_R-1.7-0.6430.4666.276-8.869-7.43
120R_G34:C53_R-0.158-0.1490.225-0.461-13.817-1.922
121R_G35:U52_R-1.834-0.4590.082-0.819-11.425-4.215
126R_G40:C46_R-0.184-0.1440.021-6.323-19.9871.105
113R_G61:C19_R-0.249-0.138-0.022-5.689-6.801-1.407
114R_G62:C18_R-0.203-0.0960.057-0.564-4.513-0.391
115R_G63:C17_R-0.225-0.2020.049-4.303-8.502-0.74
117R_G65:A15_R2.409-5.3850.0353.109-6.271102.628
15R_U6:A27_R0.039-0.0930.351-3.163-10.2216.14
17R_U8:A25_R-0.085-0.1350.207-3.835-6.960.584
111R_U12:U21_R2.601-1.242-0.731-8.794-22.333-22.613

The above values were obtained using first alternate conformation only and calculated by 3DNA program.
Xiang-Jun Lu & Wilma K. Olson (2003). '3DNA: a software package for the analysis, rebuilding and visualization of three-dimensional nucleic acid structures', Nucleic Acids Res.31(17), 5108-21.
Xiang-Jun Lu & Wilma K. Olson (2008). '3DNA: a versatile, integrated software system for the analysis, rebuilding and visualization of three-dimensional nucleic-acid structures', Nat Protoc.3(7), 1213-27.