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As of 20-Oct-2021 number of released structures: 11724
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NDB ID: 7MLX  PDB ID: 7MLX 


RNA Base-Pairs, Stacking and other pairwise interactions

CSV Format

Nucleotide 1Nucleotide 2Base-PairsBase-StackingBase-Phosphate
7MLX|1|R|A|107MLX|1|R|A|100BPh
7MLX|1|R|A|107MLX|1|R|A|9s53
7MLX|1|R|A|107MLX|1|R|G|11s35
7MLX|1|R|A|107MLX|1|R|U|23cWW
7MLX|1|R|A|157MLX|1|R|A|15n0BP
7MLX|1|R|A|157MLX|1|R|G|16s35
7MLX|1|R|A|157MLX|1|R|G|65ncWH
7MLX|1|R|A|257MLX|1|R|A|250BPh
7MLX|1|R|A|257MLX|1|R|A|9s55
7MLX|1|R|A|257MLX|1|R|C|26s35
7MLX|1|R|A|257MLX|1|R|U|24s53
7MLX|1|R|A|257MLX|1|R|U|8cWW
7MLX|1|R|A|277MLX|1|R|A|270BPh
7MLX|1|R|A|277MLX|1|R|C|26s53
7MLX|1|R|A|277MLX|1|R|C|28s35
7MLX|1|R|A|277MLX|1|R|G|7s55
7MLX|1|R|A|277MLX|1|R|U|6cWW
7MLX|1|R|A|377MLX|1|R|A|37n0BP
7MLX|1|R|A|377MLX|1|R|A|49ns33
7MLX|1|R|A|377MLX|1|R|C|36s53
7MLX|1|R|A|377MLX|1|R|C|38ns35
7MLX|1|R|A|377MLX|1|R|G|51s55
7MLX|1|R|A|377MLX|1|R|U|50cWW
7MLX|1|R|A|397MLX|1|R|A|390BPh
7MLX|1|R|A|397MLX|1|R|C|38s53
7MLX|1|R|A|397MLX|1|R|G|40s35
7MLX|1|R|A|397MLX|1|R|G|48s55
7MLX|1|R|A|397MLX|1|R|U|47cWW
7MLX|1|R|A|417MLX|1|R|A|410BPh
7MLX|1|R|A|427MLX|1|R|A|417BPh
7MLX|1|R|A|427MLX|1|R|A|42n0BP
7MLX|1|R|A|427MLX|1|R|A|45tSW
7MLX|1|R|A|427MLX|1|R|G|40s33
7MLX|1|R|A|437MLX|1|R|A|430BPh
7MLX|1|R|A|457MLX|1|R|A|42tWS
7MLX|1|R|A|457MLX|1|R|A|450BPh
7MLX|1|R|A|457MLX|1|R|C|44s53
7MLX|1|R|A|457MLX|1|R|C|46s35
7MLX|1|R|A|497MLX|1|R|A|37ns33
7MLX|1|R|A|497MLX|1|R|C|38ns55
7MLX|1|R|A|497MLX|1|R|G|48s53
7MLX|1|R|A|497MLX|1|R|U|50s35
7MLX|1|R|A|567MLX|1|R|A|560BPh
7MLX|1|R|A|567MLX|1|R|C|3ns35
7MLX|1|R|A|567MLX|1|R|G|2tWS
7MLX|1|R|A|567MLX|1|R|G|32s55
7MLX|1|R|A|567MLX|1|R|U|55s53
7MLX|1|R|A|607MLX|1|R|A|600BPh
7MLX|1|R|A|607MLX|1|R|C|59
7MLX|1|R|A|607MLX|1|R|G|20tSS
7MLX|1|R|A|97MLX|1|R|A|10s35
7MLX|1|R|A|97MLX|1|R|A|25s55
7MLX|1|R|A|97MLX|1|R|A|90BPh
7MLX|1|R|A|97MLX|1|R|U|24cWW
7MLX|1|R|A|97MLX|1|R|U|8s53
7MLX|1|R|C|147MLX|1|R|C|140BPh
7MLX|1|R|C|147MLX|1|R|C|17n6BP
7MLX|1|R|C|147MLX|1|R|G|13n7BP
7MLX|1|R|C|177MLX|1|R|C|170BPh
7MLX|1|R|C|177MLX|1|R|C|18s35
7MLX|1|R|C|177MLX|1|R|G|16s53
7MLX|1|R|C|177MLX|1|R|G|63cWW
7MLX|1|R|C|187MLX|1|R|C|17s53
7MLX|1|R|C|187MLX|1|R|C|180BPh
7MLX|1|R|C|187MLX|1|R|C|19s35
7MLX|1|R|C|187MLX|1|R|G|62cWW
7MLX|1|R|C|187MLX|1|R|G|63s55
7MLX|1|R|C|197MLX|1|R|C|18s53
7MLX|1|R|C|197MLX|1|R|C|190BPh
7MLX|1|R|C|197MLX|1|R|G|20s35
7MLX|1|R|C|197MLX|1|R|G|61cWW
7MLX|1|R|C|197MLX|1|R|G|62s55
7MLX|1|R|C|227MLX|1|R|C|220BPh
7MLX|1|R|C|227MLX|1|R|G|11cWW
7MLX|1|R|C|227MLX|1|R|U|21s53
7MLX|1|R|C|227MLX|1|R|U|23s35
7MLX|1|R|C|267MLX|1|R|A|25s53
7MLX|1|R|C|267MLX|1|R|A|27s35
7MLX|1|R|C|267MLX|1|R|C|260BPh
7MLX|1|R|C|267MLX|1|R|G|7cWW
7MLX|1|R|C|287MLX|1|R|A|27s53
7MLX|1|R|C|287MLX|1|R|C|280BPh
7MLX|1|R|C|287MLX|1|R|C|29s35
7MLX|1|R|C|287MLX|1|R|G|5cWW
7MLX|1|R|C|297MLX|1|R|C|28s53
7MLX|1|R|C|297MLX|1|R|C|290BPh
7MLX|1|R|C|297MLX|1|R|G|30s35
7MLX|1|R|C|297MLX|1|R|G|4cWW
7MLX|1|R|C|297MLX|1|R|G|5s55
7MLX|1|R|C|37MLX|1|R|A|56ns53
7MLX|1|R|C|37MLX|1|R|C|30BPh
7MLX|1|R|C|37MLX|1|R|G|2s53
7MLX|1|R|C|37MLX|1|R|G|30cWW
7MLX|1|R|C|37MLX|1|R|G|4s35
7MLX|1|R|C|337MLX|1|R|C|330BPh
7MLX|1|R|C|337MLX|1|R|G|32s53
7MLX|1|R|C|337MLX|1|R|G|34s35
7MLX|1|R|C|337MLX|1|R|G|54cWW
7MLX|1|R|C|367MLX|1|R|A|37s35
7MLX|1|R|C|367MLX|1|R|C|360BPh
7MLX|1|R|C|367MLX|1|R|G|35s53
7MLX|1|R|C|367MLX|1|R|G|51cWW
7MLX|1|R|C|387MLX|1|R|A|37ns53
7MLX|1|R|C|387MLX|1|R|A|39s35
7MLX|1|R|C|387MLX|1|R|A|49ns55
7MLX|1|R|C|387MLX|1|R|C|380BPh
7MLX|1|R|C|387MLX|1|R|G|48cWW
7MLX|1|R|C|447MLX|1|R|A|438BPh
7MLX|1|R|C|447MLX|1|R|A|45s35
7MLX|1|R|C|447MLX|1|R|C|440BPh
7MLX|1|R|C|467MLX|1|R|A|45s53
7MLX|1|R|C|467MLX|1|R|C|460BPh
7MLX|1|R|C|467MLX|1|R|G|40cWW
7MLX|1|R|C|467MLX|1|R|U|47s35
7MLX|1|R|C|537MLX|1|R|C|530BPh
7MLX|1|R|C|537MLX|1|R|G|34cWW
7MLX|1|R|C|537MLX|1|R|G|35s55
7MLX|1|R|C|537MLX|1|R|G|54s35
7MLX|1|R|C|537MLX|1|R|U|52s53
7MLX|1|R|C|597MLX|1|R|C|590BPh
7MLX|1|R|C|597MLX|1|R|U|57
7MLX|1|R|C|647MLX|1|R|C|640BPh
7MLX|1|R|C|647MLX|1|R|G|16cWW
7MLX|1|R|C|647MLX|1|R|G|63s53
7MLX|1|R|C|647MLX|1|R|G|65s33
7MLX|1|R|G|17MLX|1|R|G|1n0BP
7MLX|1|R|G|17MLX|1|R|G|2s35
7MLX|1|R|G|17MLX|1|R|G|32tWH
7MLX|1|R|G|117MLX|1|R|A|10s53
7MLX|1|R|G|117MLX|1|R|C|22cWW
7MLX|1|R|G|117MLX|1|R|G|110BPh
7MLX|1|R|G|117MLX|1|R|U|12s35
7MLX|1|R|G|117MLX|1|R|U|23s55
7MLX|1|R|G|137MLX|1|R|G|20tHW
7MLX|1|R|G|137MLX|1|R|G|614BPh
7MLX|1|R|G|167MLX|1|R|A|15s53
7MLX|1|R|G|167MLX|1|R|C|17s35
7MLX|1|R|G|167MLX|1|R|C|64cWW
7MLX|1|R|G|167MLX|1|R|G|160BPh
7MLX|1|R|G|167MLX|1|R|G|65s53
7MLX|1|R|G|27MLX|1|R|A|56tSW
7MLX|1|R|G|27MLX|1|R|C|3s35
7MLX|1|R|G|27MLX|1|R|G|1s53
7MLX|1|R|G|27MLX|1|R|G|20BPh
7MLX|1|R|G|27MLX|1|R|G|32s55
7MLX|1|R|G|27MLX|1|R|U|31cWW
7MLX|1|R|G|207MLX|1|R|A|60tSS
7MLX|1|R|G|207MLX|1|R|C|19s53
7MLX|1|R|G|207MLX|1|R|G|13tWH
7MLX|1|R|G|207MLX|1|R|G|200BPh
7MLX|1|R|G|207MLX|1|R|G|61s55
7MLX|1|R|G|207MLX|1|R|U|21s35
7MLX|1|R|G|307MLX|1|R|C|29s53
7MLX|1|R|G|307MLX|1|R|C|3cWW
7MLX|1|R|G|307MLX|1|R|G|300BPh
7MLX|1|R|G|307MLX|1|R|G|4s55
7MLX|1|R|G|307MLX|1|R|U|31s35
7MLX|1|R|G|327MLX|1|R|A|56s55
7MLX|1|R|G|327MLX|1|R|C|33s35
7MLX|1|R|G|327MLX|1|R|G|1tHW
7MLX|1|R|G|327MLX|1|R|G|2s55
7MLX|1|R|G|327MLX|1|R|U|55cWW
7MLX|1|R|G|347MLX|1|R|C|33s53
7MLX|1|R|G|347MLX|1|R|C|53cWW
7MLX|1|R|G|347MLX|1|R|G|35s35
7MLX|1|R|G|347MLX|1|R|G|54s55
7MLX|1|R|G|357MLX|1|R|C|36s35
7MLX|1|R|G|357MLX|1|R|C|53s55
7MLX|1|R|G|357MLX|1|R|G|34s53
7MLX|1|R|G|357MLX|1|R|G|350BPh
7MLX|1|R|G|357MLX|1|R|U|52cWW
7MLX|1|R|G|47MLX|1|R|C|29cWW
7MLX|1|R|G|47MLX|1|R|C|3s53
7MLX|1|R|G|47MLX|1|R|G|30s55
7MLX|1|R|G|47MLX|1|R|G|40BPh
7MLX|1|R|G|47MLX|1|R|G|5s35
7MLX|1|R|G|407MLX|1|R|A|39s53
7MLX|1|R|G|407MLX|1|R|A|42s33
7MLX|1|R|G|407MLX|1|R|C|46cWW
7MLX|1|R|G|407MLX|1|R|G|400BPh
7MLX|1|R|G|407MLX|1|R|U|47s55
7MLX|1|R|G|487MLX|1|R|A|39s55
7MLX|1|R|G|487MLX|1|R|A|49s35
7MLX|1|R|G|487MLX|1|R|C|38cWW
7MLX|1|R|G|487MLX|1|R|G|480BPh
7MLX|1|R|G|487MLX|1|R|U|47s53
7MLX|1|R|G|57MLX|1|R|C|28cWW
7MLX|1|R|G|57MLX|1|R|C|29s55
7MLX|1|R|G|57MLX|1|R|G|4s53
7MLX|1|R|G|57MLX|1|R|G|50BPh
7MLX|1|R|G|57MLX|1|R|U|6s35
7MLX|1|R|G|517MLX|1|R|A|37s55
7MLX|1|R|G|517MLX|1|R|C|36cWW
7MLX|1|R|G|517MLX|1|R|U|50s53
7MLX|1|R|G|517MLX|1|R|U|52s35
7MLX|1|R|G|547MLX|1|R|C|33cWW
7MLX|1|R|G|547MLX|1|R|C|53s53
7MLX|1|R|G|547MLX|1|R|G|34s55
7MLX|1|R|G|547MLX|1|R|U|55s35
7MLX|1|R|G|617MLX|1|R|C|19cWW
7MLX|1|R|G|617MLX|1|R|G|20s55
7MLX|1|R|G|617MLX|1|R|G|61n0BP
7MLX|1|R|G|617MLX|1|R|G|62s35
7MLX|1|R|G|627MLX|1|R|C|18cWW
7MLX|1|R|G|627MLX|1|R|C|19s55
7MLX|1|R|G|627MLX|1|R|G|61s53
7MLX|1|R|G|627MLX|1|R|G|620BPh
7MLX|1|R|G|627MLX|1|R|G|63s35
7MLX|1|R|G|637MLX|1|R|C|17cWW
7MLX|1|R|G|637MLX|1|R|C|18s55
7MLX|1|R|G|637MLX|1|R|C|64s35
7MLX|1|R|G|637MLX|1|R|G|62s53
7MLX|1|R|G|637MLX|1|R|G|630BPh
7MLX|1|R|G|657MLX|1|R|A|15ncHW
7MLX|1|R|G|657MLX|1|R|C|64s33
7MLX|1|R|G|657MLX|1|R|G|16s35
7MLX|1|R|G|657MLX|1|R|G|651BPh
7MLX|1|R|G|77MLX|1|R|A|27s55
7MLX|1|R|G|77MLX|1|R|C|26cWW
7MLX|1|R|G|77MLX|1|R|G|70BPh
7MLX|1|R|G|77MLX|1|R|U|6s53
7MLX|1|R|G|77MLX|1|R|U|8s35
7MLX|1|R|U|127MLX|1|R|G|11s53
7MLX|1|R|U|127MLX|1|R|U|120BPh
7MLX|1|R|U|127MLX|1|R|U|21ncWW
7MLX|1|R|U|217MLX|1|R|C|22s35
7MLX|1|R|U|217MLX|1|R|G|20s53
7MLX|1|R|U|217MLX|1|R|U|12ncWW
7MLX|1|R|U|217MLX|1|R|U|210BPh
7MLX|1|R|U|237MLX|1|R|A|10cWW
7MLX|1|R|U|237MLX|1|R|C|22s53
7MLX|1|R|U|237MLX|1|R|G|11s55
7MLX|1|R|U|237MLX|1|R|U|230BPh
7MLX|1|R|U|237MLX|1|R|U|24s35
7MLX|1|R|U|247MLX|1|R|A|25s35
7MLX|1|R|U|247MLX|1|R|A|9cWW
7MLX|1|R|U|247MLX|1|R|U|23s53
7MLX|1|R|U|247MLX|1|R|U|240BPh
7MLX|1|R|U|317MLX|1|R|G|2cWW
7MLX|1|R|U|317MLX|1|R|G|30s53
7MLX|1|R|U|317MLX|1|R|U|310BPh
7MLX|1|R|U|477MLX|1|R|A|39cWW
7MLX|1|R|U|477MLX|1|R|C|46s53
7MLX|1|R|U|477MLX|1|R|G|40s55
7MLX|1|R|U|477MLX|1|R|G|48s35
7MLX|1|R|U|477MLX|1|R|U|470BPh
7MLX|1|R|U|507MLX|1|R|A|37cWW
7MLX|1|R|U|507MLX|1|R|A|49s53
7MLX|1|R|U|507MLX|1|R|G|51s35
7MLX|1|R|U|507MLX|1|R|U|500BPh
7MLX|1|R|U|527MLX|1|R|C|53s35
7MLX|1|R|U|527MLX|1|R|G|35cWW
7MLX|1|R|U|527MLX|1|R|G|51s53
7MLX|1|R|U|527MLX|1|R|U|520BPh
7MLX|1|R|U|557MLX|1|R|A|56s35
7MLX|1|R|U|557MLX|1|R|G|32cWW
7MLX|1|R|U|557MLX|1|R|G|54s53
7MLX|1|R|U|557MLX|1|R|U|55n0BP
7MLX|1|R|U|577MLX|1|R|C|59
7MLX|1|R|U|577MLX|1|R|U|57
7MLX|1|R|U|67MLX|1|R|A|27cWW
7MLX|1|R|U|67MLX|1|R|G|5s53
7MLX|1|R|U|67MLX|1|R|G|7s35
7MLX|1|R|U|67MLX|1|R|U|60BPh
7MLX|1|R|U|87MLX|1|R|A|25cWW
7MLX|1|R|U|87MLX|1|R|A|9s35
7MLX|1|R|U|87MLX|1|R|G|7s53
7MLX|1|R|U|87MLX|1|R|U|80BPh


Base-PairsCount (28)Relative Frequency
cWW230.821
tWH20.071
tWS20.071
tSS10.036
Base-PhosphateCount (54)Relative Frequency
1BPh10.019
4BPh10.019
7BPh10.019
8BPh10.019
0BPh500.926
Base-StackingCount (37)Relative Frequency
s3320.054
s53200.541
s55150.405

Leontis/Westhof Classification Legend

Base-Phosphate Interactions Legend

Base-Stacking Interactions Legend

Saenger Classification Legend

Correspondence of Leontis/Westhof names to Saenger numbering (table)