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NDB ID: PD0403    PDB ID: 1OUP 


Title:

CRYSTAL STRUCTURE OF THE PERIPLASMIC ENDONUCLEASE VVN COMPLEXED WITH OCTAMER DOUBLE STRANDED DNA

Molecular Description:

Deposited:

2003-03-25

Released:

2003-08-05

Structural Keywords:

B DOUBLE HELIX, NICKED

Nucleic Acid Sequence:

Click to show/hide 3 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Li, C.-L., Hor, L.-I., Chang, Z.-F., Tsai, L.-C., Yang, W.-Z., Yuan, H.S.
DNA binding and cleavage by the periplasmic nuclease Vvn: a novel structure with a known active site. 
Embo J., 22, pp. 4014 - 4025, 2003.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 1 21 1

Cell Constants:

a = 53.74   b = 50.11   c = 89.61 (Ångstroms)

α = 90.0   β = 97.53   γ = 90.0 (degrees)

Refinement:

The structure was refined using the CNS program. The R value is 0.0 for 20729 reflections in the resolution range 19.78 to 2.3 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  0.0 sigma(I)