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NDB ID: 2D17    PDB ID: 2D17 


Title:

SOLUTION RNA STRUCTURE OF STEM-BULGE-STEM REGION OF THE HIV-1 DIMERIZATION INITIATION SITE

Molecular Description:

5'-R(*CP*GP*GP*CP*AP*AP*GP*AP*GP*GP*CP*GP*AP*CP*CP*C)-3'
5'-R(*GP*GP*GP*UP*CP*GP*GP*CP*UP*UP*GP*CP*UP*G)-3'

Structural Keywords:

A DOUBLE HELIX, BULGES

Nucleic Acid Sequence:

Click to show/hide 2 nucleic acid sequences

Protein Sequence:

No Protein Sequence Found

Primary Citation:

Baba, S., Takahashi, K., Noguchi, S., Takaku, H., Koyanagi, Y., Yamamoto, N., Kawai, G.
Solution RNA structures of the HIV-1 dimerization initiation site in the kissing-loop and extended-duplex dimers. 
J.Biochem.(Tokyo), 138, pp. 583 - 592, 2005.

Experimental Information:

SOLUTION NMR

Cell Constants:

a =   b =   c = (Ångstroms)

α =   β =   γ = (degrees)

Refinement:

The structure was refined using the program. The R value is for reflections in the resolution range to Ångstroms

Number of Models:

Number of Models: 11 Structures

Sample Details:

0.5mM 34-mer RNA FRAGMENT; 10mM phosphate buffer, 50 mM NaCl; 100% D2O 100% D2O