As of 12-Jan-2022 number of released structures: 11872
Structural Features
RNA Base-Pairs, Stacking, etc.
Interactive basepair map with 3D fragment visualization for: 2IY5 
Base Pair Hydrogen Bonding Classification
Nucleic Acid Backbone Torsions
Base Pair Morphology Parameters
Biological Assembly 1
RNA View
NDB ID: PR0233 PDB ID: 2IY5
Title:
PHENYLALANYL-TRNA SYNTHETASE FROM THERMUS THERMOPHILUS COMPLEXED WITH TRNA AND A PHENYLALANYL-ADENYLATE ANALOG
Molecular Description:
PHENYLALANYL-TRNA SYNTHETASE ALPHA CHAIN (E.C.6.1.1.20)
PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN (E.C.6.1.1.20)
Deposited:
2006-07-12Released:
2006-09-06Structural Keywords:
T, LOOP, HAIRPIN LOOP
Nucleic Acid Sequence:
Click to show/hide 1 nucleic acid sequences
Protein Sequence:
Click to show/hide 2 protein sequences
Primary Citation:
Moor, N., Kotik-Kogan, O., Tworowski, D., Sukhanova, M., Safro, M.
The crystal structure of the ternary complex of phenylalanyl-tRNA synthetase with tRNAPhe and a phenylalanyl-adenylate analogue reveals a conformational switch of the CCA end.
Biochemistry, 45, pp. 10572 - 10583, 2006.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P 32 2 1
Cell Constants:
a = 173.4 b = 173.4 c = 139.4 (Ångstroms)
α = 90.0 β = 90.0 γ = 120.0 (degrees)
Refinement:
The structure was refined using the CNS program. The R value is 0.238 for 34168 reflections in the resolution range 9.99 to 3.1 Ångstroms with Fobs > 2.5 sigma(Fobs) and with I > 0.0 sigma(I)
Download Data:
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format) 1
Structure Factors (cif format)
Coordinates (pdb format, Unix compressed(.gz))
Coordinates (cif format, Unix compressed(.gz))
NMR Restraints (cif format, Unix compressed(.gz))
XML | Complete with coordinates (xml format, GNU compressed(.gz))