A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 15-Nov-2017 number of released structures: 9208
Search for released structures

NDB ID: 2JSE    PDB ID: 2JSE 


Title:

NMR REVEALS ABSENCE OF HYDROGEN BONDING IN ADJACENT UU AND AG MISMATCHES IN AN ISOLATED INTERNAL LOOP FROM RIBOSOMAL RNA.

Molecular Description:

5'-R(*GP*GP*AP*GP*UP*GP*GP*CP*CP*GP*AP*AP*AP*GP*GP*CP*AP*UP*CP*UP*CP*C)-3'

Structural Keywords:

SINGLE STRAND, HAIRPIN LOOP, FLIPPED-OUT BASES

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

No Protein Sequence Found

Primary Citation:

Shankar, N., Xia, T., Kennedy, S.D., Krugh, T.R., Mathews, D.H., Turner, D.H.
NMR Reveals the Absence of Hydrogen Bonding in Adjacent UU and AG Mismatches in an Isolated Internal Loop from Ribosomal RNA 
Biochemistry, 46, pp. 12665 - 12678, 2007.

Experimental Information:

SOLUTION NMR

Cell Constants:

a =   b =   c = (Ångstroms)

α =   β =   γ = (degrees)

Number of Models:

Number of Models: 10 Structures

Sample Details:

2.5 mM RNA, 90% H2O/10% D2O 90% H2O/10% D2O