RNA Base-Pairs, Stacking, etc.
Interactive basepair map with 3D fragment visualization for: 2JUK 
Symbolic WebFR3D search for:2JUK 
Geometric WebFR3D search for:2JUK 
Base Pair Hydrogen Bonding Classification
Nucleic Acid Backbone Torsions
GUANIDINO NEOMYCIN B RECOGNITION OF AN HIV-1 RNA HELIX
5'-R(*GP*GP*CP*CP*UP*UP*CP*CP*CP*AP*CP*AP*AP*GP*GP*GP*AP*AP*GP*GP*CP*C)-3'
A DOUBLE HELIX, HAIRPIN LOOP
Click to show/hide 1 nucleic acid sequences
No Protein Sequence Found
Staple, D.W., Venditti, V., Niccolai, N., Elson-Schwab, L., Tor, Y., Butcher, S.E.
Guanidinoneomycin B Recognition of an HIV-1 RNA Helix. 
Chembiochem, 9, pp. 93 - 102, 2008.
SOLUTION NMR
P 1
a = 1.0 b = 1.0 c = 1.0 (Ångstroms)
α = 90.0 β = 90.0 γ = 90.0 (degrees)
Number of Models: 20 Structures
1mM mM HIV-1 frameshift site RNA, 0.5mM mM [U,G,C,A] 100% 15N, 100% 13C HIV-1 frameshift site RNA, 100% D2O 100% D2O
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format)
Structure Factors (cif format)
Coordinates (pdb format, Unix compressed(.gz))
Coordinates (cif format, Unix compressed(.gz))
NMR Restraints (cif format, Unix compressed(.gz))
XML | Complete with coordinates (xml format, GNU compressed(.gz))