A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Sep-2019 number of released structures: 10387
Search for released structures

NDB ID: NA2454    PDB ID: 3WA9 


Title:

THE NUCLEOSOME CONTAINING HUMAN H2A.Z.1

Molecular Description:

Histone H3.1
Histone H4
Histone H2A.Z
Histone H2B type 1-J/DNA

Deposited:

2013-04-30

Released:

2013-12-18

Structural Keywords:

B DOUBLE HELIX

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 4 protein sequences

Primary Citation:

Horikoshi, N., Sato, K., Shimada, K., Arimura, Y., Osakabe, A., Tachiwana, H., Hayashi-Takanaka, Y., Iwasaki, W., Kagawa, W., Harata, M., Kimura, H., Kurumizaka, H.
Structural polymorphism in the L1 loop regions of human H2A.Z.1 and H2A.Z.2 
Acta Crystallogr.,Sect.D, 69, pp. 2431 - 2439, 2013.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 21 21 21

Cell Constants:

a = 104.903   b = 109.39   c = 181.764 (Ångstroms)

α = 90.0   β = 90.0   γ = 90.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.2248 for 39710 reflections in the resolution range 38.963 to 3.07 Ångstroms with Fobs >  1.34 sigma(Fobs) and with I >  0.0 sigma(I)