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NDB ID: 4YM6    PDB ID: 4YM6 


Title:

CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME CONTAINING 6-4PP (OUTSIDE)

Molecular Description:

Histone H3.1
Histone H4
Histone H2A type 1-B/E
Histone H2B type 1-J/DNA

Deposited:

2015-03-06

Released:

2015-12-02

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 4 protein sequences

Primary Citation:

Osakabe, A., Tachiwana, H., Kagawa, W., Horikoshi, N., Matsumoto, S., Hasegawa, M., Matsumoto, N., Toga, T., Yamamoto, J., Hanaoka, F., Thoma, N.H., Sugasawa, K., Iwai, S., Kurumizaka, H.
Structural basis of pyrimidine-pyrimidone (6-4) photoproduct recognition by UV-DDB in the nucleosome 
Sci Rep, 5, pp. 16330 - 16330, 2015.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 21 21 21

Cell Constants:

a = 105.713   b = 109.483   c = 178.214 (Ångstroms)

α = 90.0   β = 90.0   γ = 90.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.2464 for 25295 reflections in the resolution range 29.831 to 3.514 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  0.0 sigma(I)