NDB ID: 4ZCF PDB ID: 4ZCF 
NAKB: 4ZCF 
Title:
STRUCTURAL BASIS OF ASYMMETRIC DNA METHYLATION AND ATP-TRIGGERED LONG-RANGE DIFFUSION BY ECOP15I
Molecular Description:
EcoP15I
ModA
EcoP15I
Res/RNA Complex
Deposited:
2015-04-15
Released:
2015-07-29
Structural Keywords:
B DOUBLE HELIX, FLIPPED OUT BASES, OVERHANGING BASES
Nucleic Acid Sequence:
Click to show/hide 2 nucleic acid sequences
Chain D
(DA)(DT)(DA)(DC)(DA)(DG)(DC)(DA)(DG)(DT)(DA)(DG)(DA)(DC)(DT)(DA)(DT)(DG)(DA)(DT)
Chain E
(DA)(DA)(DT)(DC)(DA)(DT)(DA)(DG)(DT)(DC)(DT)(DA)(DC)(DT)(DG)(DC)(DT)(DG)(DT)(DA)
Protein Sequence:
Click to show/hide 2 protein sequences
Chain A,B
MKKETIFSEVETANSKQLAVLKANFPQCFDKNGAFIQEKLLEIIRASEVELSKESYSLNWLGKSYARLLANLPPKTLLAE DKTHNQQEE
NKNSQHLLIKGDNLEVLKHMVNAYAEKVKMIYIDPPYNTGKDGFVYNDDRKFTPEQLSELAGIDLDEAKRI LEFTTKGSSSHSAWLTFI
YPRLYIARELMREDGTIFISIDHNEFSQLKLVCDEIFGEQNHVGDLVWKNATDNNPSNIAVE HEYIIVYTKNKEQLISEWKSNISDVKN
LLVNIGEEFASKYTGNELQEKYTQWFREHRSELWPLDRYKYIDKDGIYTGSQS VHNPGKEGYRYDIIHPKTKKPCKQPLMGYRFPLDTM
DRLLSEEKIIFGDDENKIIELKVYAKDYKQKLSSVIHLDGRVAT NELKELFPEMTQPFTNAKTIKLVEDLISFACDGEGIVLDFFAGSG
TTAHTVFNLNNKNKTSYQFITVQLDEPTKDKSDAM KHGYNTIFDLTKERLIRASKKNRDQGFKVYQLMPDFRAKDESELTLSNHTFFDD
VVLTPEQYDTLLTTWCLYDGSLLTTP IEDVDLGGYKAHLCDGRLYLIAPNFTSEALKALLQKVDSDKDFAPNKVVFYGSNFESAKQMEL
NEALKSYANKKSIELDL VVRN
Chain C
MSKGFTLEKNLPHQKAGVDAVMNVFVSATPHLTDNVAVRLLANPELKLSEQQYYNNIKNVQAFNGIAHSKDNHNAKSNII DVSMETGTG
KTYTYIKTIFDLNKSFGINKFIIIVPTLSIKAGTVNFLKSDALKEHFRDDYKRELRTYVVESQKNAGKNTK SYMPQAIHDFVEASNFNK
KYIHVLVINSGMINSKSLTDTYDTGLLDNQFNTPVDALRAVKPFIIIDEPHRFPTGKKTWEN IEKFNAQYIIRYGATFSEGYKNLVYRL
TAVDAFNDDLVKGIDAYIEDIVGDGNANLKFVKSDGKEATFELNENNNKKSFK LAKGESLSKTHSAIHDLTLDALNKSTAVLSNGIELK
IGSSINPYSYDQTLADNMMRKAVKEHFKLEKELLTQRPRIKPLT LFFIDDIEGYRDGNDISGSLKTKFEEYVLAEANELLKTEQDAFYK
NYLEKTVTNISSVHGGYFSKDNSDKDDKIEQEINE ILHDKELLLSLDNPRRFIFSKWTLREGWDNPNVFQICKLRSSGSTTSKLQEVGR
GLRLPVNEYMCRVKDRNFTLKYYVDF TEKDFVDSLVKEVNESSFKERVPSKFTQELKEQIMAQYPELSSRALMNELFNDEIIDDNDNFK
DSDAYSRLKSKYPAAFP IGVKPGKIKKATDGKRRTKMRVGKFSELKELWDLINQKAVIEYKINSESEFLSIFKSFMLEETERFTKSGVH
TRIDKIYI HNDMAMSKSIVSDDDDFAKLNTMSYREFLDNLSQTIFVKHGTLHKVFCDIKDTINITEYLNIQTIRKIKSGFSKYLLNNS
FNKFSLGYNLISGSIHPTKFTNADGNPLGEVLSSDLGVLQDNAKAPLDTYLFEEVFYDSELERRNITDREIQSVVVFSKI PKNSIKIPV
AGGYTYSPDFAYVVKTAEGDYLNFIIETKNVDSKDSLRLEEKRKIEHAQALFNQISQSVKVEFRTQFANDD IYQLIKSALP
Primary Citation:
Gupta, Y.K., Chan, S.H., Xu, S.Y., Aggarwal, A.K.
Structural basis of asymmetric DNA methylation and ATP-triggered long-range diffusion by EcoP15I. 
Nat Commun, 6, pp. 7363 - 7363, 2015.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P 41 21 2
Cell Constants:
a = 101.838 b = 101.838 c = 533.031 (Ångstroms)
α = 90.0 β = 90.0 γ = 90.0 (degrees)
Refinement:
The structure was refined using the BUSTER program.
The R value is 0.2206 for 85658 reflections in
the resolution range 40.0 to 2.6 Ångstroms
with Fobs > 0.0 sigma(Fobs) and with I > 0.0 sigma(I)