As of 15-Mar-2023 number of released structures: 12686
Structural Features
Base Pair Hydrogen Bonding Classification
Nucleic Acid Backbone Torsions
Base Pair Morphology Parameters
Biological Assembly 1
RNA View
NDB ID: 5B0Y PDB ID: 5B0Y 
NAKB(beta): 5B0Y
Title:
CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING HISTONE H3 WITH THE CROTONYLATED LYSINE 122
Molecular Description:
Histone H3.2
Histone H4
Histone H2A type 1-B/E
Histone H2B type 1-J/DNA Complex
Deposited:
2015-11-13Released:
2016-01-27Structural Keywords:
B DOUBLE HELIX
Nucleic Acid Sequence:
Click to show/hide 1 nucleic acid sequences
Protein Sequence:
Click to show/hide 4 protein sequences
Primary Citation:
Suzuki, Y., Horikoshi, N., Kato, D., Kurumizaka, H.
Crystal structure of the nucleosome containing histone H3 with crotonylated lysine 122
Biochem.Biophys.Res.Commun., 469, pp. 483 - 489, 2016.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P 21 21 21
Cell Constants:
a = 99.635 b = 108.773 c = 171.142 (Ångstroms)
α = 90.0 β = 90.0 γ = 90.0 (degrees)
Refinement:
The structure was refined using the PHENIX program. The R value is 0.2123 for 59767 reflections in the resolution range 49.817 to 2.557 Ångstroms with Fobs > 1.43 sigma(Fobs) and with I > 0.0 sigma(I)
Download Data:
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format) 1
Structure Factors (cif format)
Coordinates (pdb format, Unix compressed(.gz))
Coordinates (cif format, Unix compressed(.gz))
NMR Restraints (cif format, Unix compressed(.gz))
XML | Complete with coordinates (xml format, GNU compressed(.gz))