A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 19-Oct-2017 number of released structures: 9178
Search for released structures

NDB ID: 5HOD    PDB ID: 5HOD 


Title:

STRUCTURE OF LHX4 TRANSCRIPTION FACTOR COMPLEXED WITH DNA

Molecular Description:

LIM/homeobox protein Lhx4/DNA Complex

Nucleic Acid Sequence:

Click to show/hide 2 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Yin, Y., Morgunova, E., Jolma, A., Kaasinen, E., Sahu, B., Khund-Sayeed, S., Das, P.K., Kivioja, T., Dave, K., Zhong, F., Nitta, K.R., Taipale, M., Popov, A., Ginno, P.A., Domcke, S., Yan, J., Schubeler, D., Vinson, C., Taipale, J.
Impact of cytosine methylation on DNA binding specificities of human transcription factors. 
Science, 356, pp. - , 2017.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

C 2 2 21

Cell Constants:

a = 40.768   b = 68.442   c = 200.464 (Ångstroms)

α = 90.0   β = 90.0   γ = 90.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.2347 for 8147 reflections in the resolution range 50.116 to 2.682 Ångstroms with Fobs >  0.52 sigma(Fobs) and with I >  0.0 sigma(I)