A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 21-Jun-2017 number of released structures: 8945
Search for released structures

NDB ID: 5M2L    PDB ID: 5M2L 


Title:

STRUCTURE OF DNA TETRAMERIC AGCGA-QUADRUPLEX ADOPTED BY 15-MER D(GCGAGGGAGCGAGGG), VK34, OLIGONUCLEOTIDE FOUND IN REGULATORY REGION OF THE PLEKHG3 HUMAN GENE

Molecular Description:

DNA (5'-D(*GP*CP*GP*AP*GP*GP*GP*AP*GP*CP*GP*AP*GP*GP*G)-3')

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

No Protein Sequence Found

Primary Citation:

Kocman, V., Plavec, J.
Tetrahelical structural family adopted by AGCGA-rich regulatory DNA regions. 
Nat Commun, 8, pp. 15355 - 15355, 2017.

Experimental Information:

SOLUTION NMR

Cell Constants:

a =   b =   c = (Ångstroms)

α =   β =   γ = (degrees)

Refinement:

The structure was refined using the program. The R value is for reflections in the resolution range to Ångstroms

Number of Models:

Number of Models: 10 Structures

Sample Details:

1.0 mM DNA (5'-D(*GP*CP*GP*AP*GP*GP*GP*AP*GP*CP*GP*AP*GP*GP*G)-3'), 150 mM sodium chloride, 90% H2O/10% D2O 90% H2O/10% D2O