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NDB ID: 5YTT    PDB ID: 5YTT 


Title:

CRYSTAL STRUCTURE OF YB1 COLD-SHOCK DOMAIN IN COMPLEX WITH UCAUGU

Molecular Description:

Nuclease-sensitive element-binding protein 1/RNA Complex

Deposited:

2017-11-20

Released:

2018-12-05

Structural Keywords:

SMALL NA FRAGMENT

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Yang, X.J., Zhu, H., Mu, S.R., Wei, W.J., Yuan, X., Wang, M., Liu, Y., Hui, J., Huang, Y.
Crystal structure of a Y-box binding protein 1 (YB-1)-RNA complex reveals key features and residues interacting with RNA. 
J.Biol.Chem., 294, pp. 10998 - 11010, 2019.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 62

Cell Constants:

a = 66.218   b = 66.218   c = 36.08 (Ångstroms)

α = 90.0   β = 90.0   γ = 120.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.1859 for 10965 reflections in the resolution range 30.0 to 1.6 Ångstroms with Fobs >  1.36 sigma(Fobs) and with I >  0.0 sigma(I)