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NDB ID: 5JRG    PDB ID: 5JRG 


Title:

CRYSTAL STRUCTURE OF THE NUCLEOSOME CONTAINING THE DNA WITH TETRAHYDROFURAN (THF)

Molecular Description:

Histone H3.1
Histone H4
Histone H2A type 1-B/E
Histone H2B type 1-J/DNA Complex

Deposited:

2016-05-06

Released:

2017-03-08

Structural Keywords:

B DOUBLE HELIX

Nucleic Acid Sequence:

Click to show/hide 2 nucleic acid sequences

Protein Sequence:

Click to show/hide 4 protein sequences

Primary Citation:

Osakabe, A., Arimura, Y., Matsumoto, S., Horikoshi, N., Sugasawa, K., Kurumizaka, H.
Polymorphism of apyrimidinic DNA structures in the nucleosome 
Sci Rep, 7, pp. 41783 - 41783, 2017.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 21 21 21

Cell Constants:

a = 99.491   b = 108.773   c = 169.571 (Ångstroms)

α = 90.0   β = 90.0   γ = 90.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.1956 for 64243 reflections in the resolution range 49.146 to 2.5 Ångstroms with Fobs >  1.44 sigma(Fobs) and with I >  0.0 sigma(I)