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NDB ID: 6A6J    PDB ID: 6A6J 


Title:

CRYSTAL STRUCTURE OF ZEBRA FISH Y-BOX PROTEIN1 (YB-1) COLD-SHOCK DOMAIN IN COMPLEX WITH 6MER M5C RNA

Molecular Description:

Nuclease-sensitive element-binding protein 1/RNA Complex

Deposited:

2018-06-28

Released:

2019-06-19

Structural Keywords:

SMALL NA FRAGMENT

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Yang, Y., Wang, L., Han, X., Yang, W.L., Zhang, M., Ma, H.L., Sun, B.F., Li, A., Xia, J., Chen, J., Heng, J., Wu, B., Chen, Y.S., Xu, J.W., Yang, X., Yao, H., Sun, J., Lyu, C., Wang, H.L., Huang, Y., Sun, Y.P., Zhao, Y.L., Meng, A., Ma, J., Liu, F., Yang, Y.G.
RNA 5-Methylcytosine Facilitates the Maternal-to-Zygotic Transition by Preventing Maternal mRNA Decay. 
Mol.Cell, 75, pp. 1188 - 1202.e11, 2019.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

C 1 2 1

Cell Constants:

a = 62.201   b = 60.866   c = 56.513 (Ångstroms)

α = 90.0   β = 118.97   γ = 90.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.2295 for 7519 reflections in the resolution range 27.21 to 2.255 Ångstroms with Fobs >  1.35 sigma(Fobs) and with I >  0.0 sigma(I)