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NDB ID: 6D1V    PDB ID: 6D1V 


Title:

CRYSTAL STRUCTURE OF E. COLI RPPH-DAPF COMPLEX, MONOMER BOUND TO RNA

Molecular Description:

Diaminopimelate epimerase
RNA pyrophosphohydrolase/RNA Complex

Structural Keywords:

SMALL NA FRAGMENT

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 2 protein sequences

Primary Citation:

Gao, A., Vasilyev, N., Luciano, D.J., Levenson-Palmer, R., Richards, J., Marsiglia, W.M., Traaseth, N.J., Belasco, J.G., Serganov, A.
Structural and kinetic insights into stimulation of RppH-dependent RNA degradation by the metabolic enzyme DapF. 
Nucleic Acids Res., 46, pp. 6841 - 6856, 2018.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

C 2 2 21

Cell Constants:

a = 160.644   b = 191.986   c = 51.207 (Ångstroms)

α = 90.0   β = 90.0   γ = 90.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.1994 for 70302 reflections in the resolution range 61.601 to 1.81 Ångstroms with Fobs >  1.35 sigma(Fobs) and with I >  0.0 sigma(I)