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NDB ID: 6D3P    PDB ID: 6D3P 


Title:

CRYSTAL STRUCTURE OF AN EXORIBONUCLEASE-RESISTANT RNA FROM SWEET CLOVER NECROTIC MOSAIC VIRUS (SCNMV)

Molecular Description:

RNA (45-MER)

Structural Keywords:

A DOUBLE HELIX, HAIRPIN LOOP, INTERNAL LOOP

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

No Protein Sequence Found

Primary Citation:

Steckelberg, A.L., Akiyama, B.M., Costantino, D.A., Sit, T.L., Nix, J.C., Kieft, J.S.
A folded viral noncoding RNA blocks host cell exoribonucleases through a conformationally dynamic RNA structure. 
Proc. Natl. Acad. Sci. U.S.A., 115, pp. 6404 - 6409, 2018.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 61 2 2

Cell Constants:

a = 83.4   b = 83.4   c = 94.21 (Ångstroms)

α = 90.0   β = 90.0   γ = 120.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.2434 for 8106 reflections in the resolution range 39.455 to 2.9 Ångstroms with Fobs >  1.34 sigma(Fobs) and with I >  0.0 sigma(I)