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NDB ID: 6DT1    PDB ID: 6DT1 


Title:

CRYSTAL STRUCTURE OF THE LIGASE FROM BACTERIOPHAGE T4 COMPLEXED WITH DNA INTERMEDIATE

Molecular Description:

DNA dC->dU-editing enzyme APOBEC-3B/DNA Complex

Structural Keywords:

RH DOUBLE HELIX

Nucleic Acid Sequence:

Click to show/hide 3 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Shi, K., Bohl, T.E., Park, J., Zasada, A., Malik, S., Banerjee, S., Tran, V., Li, N., Yin, Z., Kurniawan, F., Orellana, K., Aihara, H.
T4 DNA ligase structure reveals a prototypical ATP-dependent ligase with a unique mode of sliding clamp interaction. 
Nucleic Acids Res., , pp. - , 2018.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 1

Cell Constants:

a = 63.526   b = 67.429   c = 114.635 (Ångstroms)

α = 88.78   β = 80.94   γ = 62.97 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.1723 for 42747 reflections in the resolution range 113.021 to 2.75 Ångstroms with Fobs >  1.98 sigma(Fobs) and with I >  0.0 sigma(I)