A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 4-Dec-2019 number of released structures: 10490
Search for released structures

NDB ID: 6I1W    PDB ID: 6I1W 


Title:

STRUCTURE OF THE RNA DUPLEX CONTAINING PSEUDOURIDINE RESIDUE (5'-GP(PSU)PC-3' SEQUENCE CONTEXT)

Molecular Description:

RNA (5'-R(*UP*CP*AP*GP*(PSU)P*CP*AP*GP*U)-3')
RNA (5'-R(*AP*CP*UP*GP*AP*CP*UP*GP*A)-3')

Deposited:

2018-10-30

Released:

2019-11-20

Nucleic Acid Sequence:

Click to show/hide 2 nucleic acid sequences

Protein Sequence:

No Protein Sequence Found

Primary Citation:

Deb, I., Popenda, L., Sarzynska, J., Malgowska, M., Lahiri, A., Gdaniec, Z., Kierzek, R.
Computational and NMR studies of RNA duplexes with an internal pseudouridine-adenosine base pair. 
Sci Rep, 9, pp. 16278 - 16278, 2019.

Experimental Information:

SOLUTION NMR

Number of Models:

Number of Models: 10 Structures

Sample Details:

0.5 mM pUCAG(PSU)CAGU, 0.5 mM pACUGACUGA, 10 mM sodium phosphate, 150 mM sodium chloride, 0.1 mM EDTA, 100% D2O 100% D2O