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NDB ID: 6IJ2    PDB ID: 6IJ2 


Title:

CRYSTAL STRUCTURE OF A STANDALONE VERSATILE EAL PROTEIN FROM VIBRIO CHOLERAE O395 - 5'-PGPG BOUND FORM

Molecular Description:

cyclic di nucleotide phoshodiesterase (E.C.3.1.4.52)

Deposited:

2018-10-08

Released:

2019-10-09

Structural Keywords:

SMALL NA FRAGMENT

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Yadav, M., Pal, K., Sen, U.
Structures of c-di-GMP/cGAMP degrading phosphodiesterase VcEAL: identification of a novel conformational switch and its implication. 
Biochem.J., 476, pp. 3333 - 3353, 2019.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 1 21 1

Cell Constants:

a = 73.483   b = 42.711   c = 158.47 (Ångstroms)

α = 90.0   β = 94.94   γ = 90.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.1837 for 106643 reflections in the resolution range 51.511 to 1.7 Ångstroms with Fobs >  1.34 sigma(Fobs) and with I >  0.0 sigma(I)