As of 31-May-2023 number of released structures: 12820
Structural Features
Base Pair Hydrogen Bonding Classification
Nucleic Acid Backbone Torsions
Base Pair Morphology Parameters
Biological Assembly 1
RNA View
NDB ID: 6JOU PDB ID: 6JOU 
NAKB: 6JOU
Title:
CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME CONTAINING H2A.Z.1 S42R
Molecular Description:
Histone H3.1
Histone H4
Histone H2A.Z
Histone H2B type 1-J/DNA Complex
Deposited:
2019-03-23Released:
2020-03-25Structural Keywords:
B DOUBLE HELIX
Nucleic Acid Sequence:
Click to show/hide 1 nucleic acid sequences
Protein Sequence:
Click to show/hide 4 protein sequences
Primary Citation:
Horikoshi, N., Kujirai, T., Sato, K., Kimura, H., Kurumizaka, H.
Structure-based design of an H2A.Z.1 mutant stabilizing a nucleosome in vitro and in vivo.
Biochem.Biophys.Res.Commun., 515, pp. 719 - 724, 2019.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P 21 21 21
Cell Constants:
a = 98.955 b = 108.17 c = 169.812 (Ångstroms)
α = 90.0 β = 90.0 γ = 90.0 (degrees)
Refinement:
The structure was refined using the PHENIX program. The R value is 0.2088 for 95610 reflections in the resolution range 49.477 to 2.17 Ångstroms with Fobs > 1.36 sigma(Fobs) and with I > 0.0 sigma(I)
Download Data:
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format) 1
Structure Factors (cif format)
Coordinates (pdb format, Unix compressed(.gz))
Coordinates (cif format, Unix compressed(.gz))
NMR Restraints (cif format, Unix compressed(.gz))
XML | Complete with coordinates (xml format, GNU compressed(.gz))