As of 16-Oct-2019 number of released structures: 10422
Structural Features
Base Pair Hydrogen Bonding Classification
Nucleic Acid Backbone Torsions
Base Pair Morphology Parameters
Biological Assembly 1
RNA View
NDB ID: 6JR1 PDB ID: 6JR1 
Title:
CRYSTAL STRUCTURE OF THE HUMAN NUCLEOSOME PHASED WITH 16 SELENIUM ATOMS
Molecular Description:
Histone H3.1
Histone H4
Histone H2A type 1-B/E
Histone H2B type 1-J/DNA Complex
Deposited:
2019-04-02Released:
2019-10-02Structural Keywords:
B DOUBLE HELIX
Nucleic Acid Sequence:
Click to show/hide 1 nucleic acid sequences
Protein Sequence:
Click to show/hide 4 protein sequences
Primary Citation:
Saotome, M., Horikoshi, N., Urano, K., Kujirai, T., Yuzurihara, H., Kurumizaka, H., Kagawa, W.
Structure determination of the nucleosome core particle by selenium SAD phasing
Acta Crystallogr.,Sect.D, 75, pp. - , 2019.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P 21 21 21
Cell Constants:
a = 99.461 b = 108.539 c = 170.462 (Ångstroms)
α = 90.0 β = 90.0 γ = 90.0 (degrees)
Refinement:
The structure was refined using the PHENIX program. The R value is 0.2104 for 72795 reflections in the resolution range 47.74 to 2.4 Ångstroms with Fobs > 1.35 sigma(Fobs) and with I > 0.0 sigma(I)
Download Data:
Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))
Asymmetric Unit coordinates (cif format, Unix compressed(.gz))
Biological Assembly coordinates (pdb format) 1
Structure Factors (cif format)
Coordinates (pdb format, Unix compressed(.gz))
Coordinates (cif format, Unix compressed(.gz))
NMR Restraints (cif format, Unix compressed(.gz))
XML | Complete with coordinates (xml format, GNU compressed(.gz))