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NDB ID: 6JV3    PDB ID: 6JV3 


Title:

CRYSTAL STRUCTURE OF 5-HYDOXYLMETHYLCYTOSINE CONTAINING DECAMER DSDNA

Molecular Description:

DNA (5'-D(*CP*CP*AP*GP*(5HC)P*GP*CP*TP*GP*G)-3')

Deposited:

2019-04-15

Released:

2019-07-31

Structural Keywords:

B DOUBLE HELIX

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

No Protein Sequence Found

Primary Citation:

Fu, T., Liu, L., Yang, Q.L., Wang, Y., Xu, P., Zhang, L., Liu, S., Dai, Q., Ji, Q., Xu, G.L., He, C., Luo, C., Zhang, L.
Thymine DNA glycosylase recognizes the geometry alteration of minor grooves induced by 5-formylcytosine and 5-carboxylcytosine
Chem Sci, , pp. - , 2019.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

C 1 2 1

Cell Constants:

a = 63.907   b = 23.818   c = 85.556 (Ångstroms)

α = 90.0   β = 111.12   γ = 90.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.2309 for 2611 reflections in the resolution range 26.604 to 2.851 Ångstroms with Fobs >  1.38 sigma(Fobs) and with I >  0.0 sigma(I)