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NDB ID: 6KTC    PDB ID: 6KTC 


Title:

CRYSTAL STRUCTURE OF YBX1 CSD WITH M5C RNA

Molecular Description:

Nuclease-sensitive element-binding protein 1/RNA Complex

Deposited:

2019-08-27

Released:

2020-02-05

Structural Keywords:

SMALL NA FRAGMENT

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Zou, F., Tu, R., Duan, B., Yang, Z., Ping, Z., Song, X., Chen, S., Price, A., Li, H., Scott, A., Perera, A., Li, S., Xie, T.
DrosophilaYBX1 homolog YPS promotes ovarian germ line stem cell development by preferentially recognizing 5-methylcytosine RNAs. 
Proc.Natl.Acad.Sci.USA, 117, pp. 3603 - 3609, 2020.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 62

Cell Constants:

a = 66.706   b = 66.706   c = 34.224 (Ångstroms)

α = 90.0   β = 90.0   γ = 120.0 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.2388 for 5075 reflections in the resolution range 33.353 to 2.008 Ångstroms with Fobs >  1.39 sigma(Fobs) and with I >  0.0 sigma(I)