NDB ID: 6LAB PDB ID: 6LAB 
Title:
169 BP NUCLEOSOME, HARBORING COHESIVE DNA TERMINI, ASSEMBLED WITH LINKER HISTONE H1.0
Molecular Description:
Histone H3.1
Histone H4
Histone H2AX
Histone H2B type 1-J/DNA Complex
Deposited:
2019-11-12
Released:
2021-02-17
Structural Keywords:
B DOUBLE HELIX
Nucleic Acid Sequence:
Click to show/hide 2 nucleic acid sequences
Chain I,S
(DG)(DC)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DC)(DA)(DC)(DA)(DA)(DT)(DC)(DC) (DC)(DG)(
DG)(DT)(DG)(DC)(DC)(DG)(DA)(DG)(DG)(DC)(DC)(DG)(DC)(DT)(DC)(DA)(DA)(DT) (DT)(DG)(DG)(DT)(D
C)(DG)(DT)(DA)(DG)(DA)(DC)(DA)(DG)(DC)(DT)(DC)(DT)(DA)(DG)(DC) (DA)(DC)(DC)(DG)(DC)(DT)(DT
)(DA)(DA)(DA)(DC)(DG)(DC)(DA)(DC)(DG)(DT)(DA)(DC)(DG) (DG)(DA)(DA)(DT)(DC)(DC)(DG)(DT)(DA)
(DC)(DG)(DT)(DG)(DC)(DG)(DT)(DT)(DT)(DA)(DA) (DG)(DC)(DG)(DG)(DT)(DG)(DC)(DT)(DA)(DG)(DA)(
DG)(DC)(DT)(DG)(DT)(DC)(DT)(DA)(DC) (DG)(DA)(DC)(DC)(DA)(DA)(DT)(DT)(DG)(DA)(DG)(DC)(DG)(D
G)(DC)(DC)(DT)(DC)(DG)(DG) (DC)(DA)(DC)(DC)(DG)(DG)(DG)(DA)(DT)(DT)(DG)(DT)(DG)(DA)(DA)(DA
)(DA)(DA)(DA)(DA) (DA)(DA)(DA)(DG)(DC)(DT)(DG)(DC)(DA)
Chain J,T
(DG)(DC)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DC)(DA)(DC)(DA)(DA)(DT)(DC)(DC) (DC)(DG)(
DG)(DT)(DG)(DC)(DC)(DG)(DA)(DG)(DG)(DC)(DC)(DG)(DC)(DT)(DC)(DA)(DA)(DT) (DT)(DG)(DG)(DT)(D
C)(DG)(DT)(DA)(DG)(DA)(DC)(DA)(DG)(DC)(DT)(DC)(DT)(DA)(DG)(DC) (DA)(DC)(DC)(DG)(DC)(DT)(DT
)(DA)(DA)(DA)(DC)(DG)(DC)(DA)(DC)(DG)(DT)(DA)(DC)(DG) (DG)(DA)(DT)(DT)(DC)(DC)(DG)(DT)(DA)
(DC)(DG)(DT)(DG)(DC)(DG)(DT)(DT)(DT)(DA)(DA) (DG)(DC)(DG)(DG)(DT)(DG)(DC)(DT)(DA)(DG)(DA)(
DG)(DC)(DT)(DG)(DT)(DC)(DT)(DA)(DC) (DG)(DA)(DC)(DC)(DA)(DA)(DT)(DT)(DG)(DA)(DG)(DC)(DG)(D
G)(DC)(DC)(DT)(DC)(DG)(DG) (DC)(DA)(DC)(DC)(DG)(DG)(DG)(DA)(DT)(DT)(DG)(DT)(DG)(DA)(DA)(DA
)(DA)(DA)(DA)(DA) (DA)(DA)(DA)(DG)(DC)(DT)(DG)(DC)(DA)
Protein Sequence:
Click to show/hide 5 protein sequences
Chain A,E,K,O
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK TDLRFQSSA
VMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Chain C,G,M,Q
MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRII PRHLQLAIR
NDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Chain B,F,L,P
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRK TVTAMDVVY
ALKRQGRTLYGFGG
Chain D,H,N,R
MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASR LAHYNKRST
ITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Chain U,V
MTENSTSAPAAKPKRAKASKKSTDHPKYSDMIVAAIQAEKNRAGSSRQSIQKYIKSHYKVGENADSQIKLSIKRLVTTGV LKQTKGVGA
SGSFRLAKSDEPKKSVAFKKTKKEIKKVATPKKASKPKKAASKAPTKKPKATPVKKAKKKLAATPKKAKKP KTVKAKPVKASKPKKAKP
VKPKAKSSAKRAGKKK
Primary Citation:
Sharma, D., Davey, C.A., Adhireksan, Z.
Nucleosome 169 bp with linker histone H1.0
To Be Published, , pp. - , 0.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P 1 21 1
Cell Constants:
a = 104.799 b = 102.76 c = 218.05 (Ångstroms)
α = 90.0 β = 97.4 γ = 90.0 (degrees)
Refinement:
The structure was refined using the REFMAC program.
The R value is 0.2097 for 74093 reflections in
the resolution range 216.23 to 3.2 Ångstroms
with Fobs > 0.0 sigma(Fobs) and with I > 0.0 sigma(I)