NDB ID: 6LER PDB ID: 6LER 
Title:
169 BP NUCLEOSOME HARBORING NON-IDENTICAL COHESIVE DNA TERMINI.
Molecular Description:
Deposited:
2019-11-26
Released:
2021-03-03
Structural Keywords:
B DOUBLE HELIX
Nucleic Acid Sequence:
Click to show/hide 2 nucleic acid sequences
Chain S,J
(DC)(DG)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DG)(DC)(DA)(DT)(DG)(DT)(DG)(DC) (DC)(DG)(
DG)(DT)(DC)(DT)(DC)(DA)(DC)(DA)(DC)(DG)(DT)(DG)(DC)(DC)(DT)(DG)(DG)(DA) (DG)(DA)(DC)(DT)(D
A)(DG)(DT)(DA)(DA)(DG)(DC)(DG)(DC)(DT)(DT)(DC)(DT)(DA)(DG)(DT) (DG)(DG)(DC)(DG)(DG)(DT)(DT
)(DA)(DA)(DA)(DA)(DC)(DG)(DC)(DG)(DG)(DT)(DA)(DG)(DA) (DC)(DA)(DG)(DC)(DG)(DC)(DG)(DT)(DA)
(DC)(DG)(DT)(DG)(DC)(DG)(DT)(DT)(DT)(DA)(DA) (DG)(DC)(DG)(DG)(DT)(DG)(DC)(DT)(DA)(DG)(DA)(
DG)(DC)(DT)(DG)(DT)(DC)(DT)(DA)(DC) (DG)(DA)(DC)(DC)(DA)(DA)(DT)(DT)(DG)(DA)(DG)(DC)(DG)(D
G)(DC)(DC)(DT)(DC)(DG)(DG) (DC)(DA)(DC)(DC)(DG)(DG)(DG)(DA)(DT)(DG)(DC)(DT)(DG)(DT)(DT)(DT
)(DT)(DT)(DT)(DT) (DT)(DT)(DT)(DG)(DG)(DG)(DT)(DA)(DC)
Chain T,I
(DC)(DC)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DC)(DA)(DG)(DC)(DA)(DT)(DC)(DC) (DC)(DG)(
DG)(DT)(DG)(DC)(DC)(DG)(DA)(DG)(DG)(DC)(DC)(DG)(DC)(DT)(DC)(DA)(DA)(DT) (DT)(DG)(DG)(DT)(D
C)(DG)(DT)(DA)(DG)(DA)(DC)(DA)(DG)(DC)(DT)(DC)(DT)(DA)(DG)(DC) (DA)(DC)(DC)(DG)(DC)(DT)(DT
)(DA)(DA)(DA)(DC)(DG)(DC)(DA)(DC)(DG)(DT)(DA)(DC)(DG) (DC)(DG)(DC)(DT)(DG)(DT)(DC)(DT)(DA)
(DC)(DC)(DG)(DC)(DG)(DT)(DT)(DT)(DT)(DA)(DA) (DC)(DC)(DG)(DC)(DC)(DA)(DC)(DT)(DA)(DG)(DA)(
DA)(DG)(DC)(DG)(DC)(DT)(DT)(DA)(DC) (DT)(DA)(DG)(DT)(DC)(DT)(DC)(DC)(DA)(DG)(DG)(DC)(DA)(D
C)(DG)(DT)(DG)(DT)(DG)(DA) (DG)(DA)(DC)(DC)(DG)(DG)(DC)(DA)(DC)(DA)(DT)(DG)(DC)(DA)(DA)(DA
)(DA)(DA)(DA)(DA) (DA)(DA)(DA)(DC)(DG)(DA)(DG)(DC)(DT)
Protein Sequence:
Click to show/hide 4 protein sequences
Chain K,O,A,E
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK TDLRFQSSA
VMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Chain M,Q,C,G
MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRII PRHLQLAIR
NDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Chain L,P,B,F
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRK TVTAMDVVY
ALKRQGRTLYGFGG
Chain N,R,D,H
MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASR LAHYNKRST
ITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Primary Citation:
Adhireksan, Z., Sharma, D., Lee, P.L., Bao, Q., Padavattan, S., Shum, W.K., Davey, G.E., Davey, C.A.
Engineering nucleosomes for generating diverse chromatin assemblies. 
Nucleic Acids Res., 49, pp. e52 - e52, 2021.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P 1
Cell Constants:
a = 107.338 b = 116.545 c = 117.9 (Ångstroms)
α = 61.5 β = 82.77 γ = 64.23 (degrees)
Refinement:
The structure was refined using the REFMAC program.
The R value is 0.2094 for 86975 reflections in
the resolution range 48.12 to 3.0 Ångstroms
with Fobs > 0.0 sigma(Fobs) and with I > 0.0 sigma(I)