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NDB ID: 6LFF    PDB ID: 6LFF 


Title:

TRANSCRIPTION FACTOR SATB1 CUTR1 DOMAIN IN COMPLEX WITH A PHOSPHOROTHIOATE DNA

Molecular Description:

DNA-binding protein SATB1/DNA Complex

Deposited:

2019-12-02

Released:

2020-04-01

Structural Keywords:

B DOUBLE HELIX

Nucleic Acid Sequence:

Click to show/hide 2 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Yamasaki, K., Akutsu, Y., Yamasaki, T., Miyagishi, M., Kubota, T.
Enhanced affinity of racemic phosphorothioate DNA with transcription factor SATB1 arising from diastereomer-specific hydrogen bonds and hydrophobic contacts. 
Nucleic Acids Res., 48, pp. 4551 - 4561, 2020.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 31

Cell Constants:

a = 45.32   b = 45.32   c = 97.862 (Ångstroms)

α = 90.0   β = 90.0   γ = 120.0 (degrees)

Refinement:

The structure was refined using the REFMAC program. The R value is 0.23207 for 18596 reflections in the resolution range 19.63 to 1.79 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  0.0 sigma(I)