NDB ID: 6M3V PDB ID: 6M3V 
Title:
355 BP DI-NUCLEOSOME HARBORING COHESIVE DNA TERMINI
Molecular Description:
Histone H3.1
Histone H4
Histone H2AX
Histone H2B type 1-J/DNA Complex
Deposited:
2020-03-04
Released:
2020-10-07
Structural Keywords:
B DOUBLE HELIX
Nucleic Acid Sequence:
Click to show/hide 2 nucleic acid sequences
Chain I
(DC)(DG)(DC)(DT)(DG)(DA)(DC)(DG)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DC)(DG) (DC)(DA)(
DT)(DC)(DC)(DC)(DG)(DG)(DT)(DG)(DC)(DC)(DG)(DA)(DG)(DG)(DC)(DC)(DG)(DC) (DT)(DC)(DA)(DA)(D
T)(DT)(DG)(DG)(DT)(DC)(DG)(DT)(DA)(DG)(DA)(DC)(DA)(DG)(DC)(DT) (DC)(DT)(DA)(DG)(DC)(DA)(DC
)(DC)(DG)(DC)(DT)(DT)(DA)(DA)(DA)(DC)(DG)(DC)(DA)(DC) (DG)(DT)(DA)(DC)(DG)(DC)(DG)(DC)(DT)
(DG)(DT)(DC)(DT)(DA)(DC)(DC)(DG)(DC)(DG)(DT) (DT)(DT)(DT)(DA)(DA)(DC)(DC)(DG)(DC)(DC)(DA)(
DC)(DT)(DA)(DG)(DA)(DA)(DG)(DC)(DG) (DC)(DT)(DT)(DA)(DC)(DT)(DA)(DG)(DT)(DC)(DT)(DC)(DC)(D
A)(DG)(DG)(DC)(DA)(DC)(DG) (DT)(DG)(DT)(DG)(DA)(DG)(DA)(DC)(DC)(DG)(DG)(DC)(DA)(DC)(DA)(DT
)(DG)(DA)(DA)(DA) (DA)(DA)(DA)(DA)(DA)(DA)(DA)(DT)(DG)(DC)(DA)(DT)(DG)(DC)(DT)(DC)(DG)(DA)
(DG)(DT) (DA)(DT)(DG)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DA)(DT)(DC)(DG)(DC)(DA)(DT)(DC)
(DC)(DC)(DG)(DG)(DT)(DG)(DC)(DC)(DG)(DA)(DG)(DG)(DC)(DC)(DG)(DC)(DT)(DC)(DA)(DA) (DT)(DT)(
DG)(DG)(DT)(DC)(DG)(DT)(DA)(DG)(DA)(DC)(DA)(DG)(DC)(DT)(DC)(DT)(DA)(DG) (DC)(DA)(DC)(DC)(D
G)(DC)(DT)(DT)(DA)(DA)(DA)(DC)(DG)(DC)(DA)(DC)(DG)(DT)(DA)(DC) (DG)(DC)(DG)(DC)(DT)(DG)(DT
)(DC)(DT)(DA)(DC)(DC)(DG)(DC)(DG)(DT)(DT)(DT)(DT)(DA) (DA)(DC)(DC)(DG)(DC)(DC)(DA)(DC)(DT)
(DA)(DG)(DA)(DA)(DG)(DC)(DG)(DC)(DT)(DT)(DA) (DC)(DT)(DA)(DG)(DT)(DC)(DT)(DC)(DC)(DA)(DG)(
DG)(DC)(DA)(DC)(DG)(DT)(DG)(DT)(DG) (DA)(DG)(DA)(DC)(DC)(DG)(DG)(DC)(DA)(DC)(DA)(DT)(DG)(D
A)(DA)(DA)(DA)(DA)(DA)(DA) (DA)(DA)(DA)(DC)(DG)(DT)(DC)(DA)(DG)(DC)(DG)(DG)(DT)(DA)(DC)
Chain J
(DC)(DG)(DC)(DT)(DG)(DA)(DC)(DG)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DC)(DA) (DT)(DG)(
DT)(DG)(DC)(DC)(DG)(DG)(DT)(DC)(DT)(DC)(DA)(DC)(DA)(DC)(DG)(DT)(DG)(DC) (DC)(DT)(DG)(DG)(D
A)(DG)(DA)(DC)(DT)(DA)(DG)(DT)(DA)(DA)(DG)(DC)(DG)(DC)(DT)(DT) (DC)(DT)(DA)(DG)(DT)(DG)(DG
)(DC)(DG)(DG)(DT)(DT)(DA)(DA)(DA)(DA)(DC)(DG)(DC)(DG) (DG)(DT)(DA)(DG)(DA)(DC)(DA)(DG)(DC)
(DG)(DC)(DG)(DT)(DA)(DC)(DG)(DT)(DG)(DC)(DG) (DT)(DT)(DT)(DA)(DA)(DG)(DC)(DG)(DG)(DT)(DG)(
DC)(DT)(DA)(DG)(DA)(DG)(DC)(DT)(DG) (DT)(DC)(DT)(DA)(DC)(DG)(DA)(DC)(DC)(DA)(DA)(DT)(DT)(D
G)(DA)(DG)(DC)(DG)(DG)(DC) (DC)(DT)(DC)(DG)(DG)(DC)(DA)(DC)(DC)(DG)(DG)(DG)(DA)(DT)(DG)(DC
)(DG)(DA)(DT)(DT) (DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DC)(DA)(DT)(DA)(DC)(DT)(DC)(DG)(DA)(DG)
(DC)(DA) (DT)(DG)(DC)(DA)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DT)(DC)(DA)(DT)(DG)(DT)(DG)
(DC)(DC)(DG)(DG)(DT)(DC)(DT)(DC)(DA)(DC)(DA)(DC)(DG)(DT)(DG)(DC)(DC)(DT)(DG)(DG) (DA)(DG)(
DA)(DC)(DT)(DA)(DG)(DT)(DA)(DA)(DG)(DC)(DG)(DC)(DT)(DT)(DC)(DT)(DA)(DG) (DT)(DG)(DG)(DC)(D
G)(DG)(DT)(DT)(DA)(DA)(DA)(DA)(DC)(DG)(DC)(DG)(DG)(DT)(DA)(DG) (DA)(DC)(DA)(DG)(DC)(DG)(DC
)(DG)(DT)(DA)(DC)(DG)(DT)(DG)(DC)(DG)(DT)(DT)(DT)(DA) (DA)(DG)(DC)(DG)(DG)(DT)(DG)(DC)(DT)
(DA)(DG)(DA)(DG)(DC)(DT)(DG)(DT)(DC)(DT)(DA) (DC)(DG)(DA)(DC)(DC)(DA)(DA)(DT)(DT)(DG)(DA)(
DG)(DC)(DG)(DG)(DC)(DC)(DT)(DC)(DG) (DG)(DC)(DA)(DC)(DC)(DG)(DG)(DG)(DA)(DT)(DG)(DC)(DG)(D
T)(DT)(DT)(DT)(DT)(DT)(DT) (DT)(DT)(DT)(DC)(DG)(DT)(DC)(DA)(DG)(DC)(DG)(DG)(DT)(DA)(DC)
Protein Sequence:
Click to show/hide 4 protein sequences
Chain A,E,K,O
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFK TDLRFQSSA
VMALQEACEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Chain C,G,M,Q
MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLTAEILELAGNAARDNKKTRII PRHLQLAIR
NDEELNKLLGRVTIAQGGVLPNIQAVLLPKKTESHHKAKGK
Chain B,F,L,P
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRK TVTAMDVVY
ALKRQGRTLYGFGG
Chain D,H,N,R
MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAMGIMNSFVNDIFERIAGEASR LAHYNKRST
ITSREIQTAVRLLLPGELAKHAVSEGTKAVTKYTSAK
Primary Citation:
Adhireksan, Z., Sharma, D., Lee, P.L., Davey, C.A.
Near-atomic resolution structures of interdigitated nucleosome fibres.
Nat Commun, 11, pp. 4747 - 4747, 2020.
Experimental Information:
X-RAY DIFFRACTION
Space Group:
P 1 21 1
Cell Constants:
a = 88.987 b = 228.97 c = 118.839 (Ångstroms)
α = 90.0 β = 92.68 γ = 90.0 (degrees)
Refinement:
The structure was refined using the REFMAC program.
The R value is 0.2061 for 25862 reflections in
the resolution range 49.33 to 4.6 Ångstroms
with Fobs > 0.0 sigma(Fobs) and with I > 0.0 sigma(I)
