A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 18-Sep-2019 number of released structures: 10387
Search for released structures

NDB ID: 6OD4    PDB ID: 6OD4 


Title:

HUMAN TCF4 C-TERMINAL BHLH DOMAIN IN COMPLEX WITH 11-BP OLIGONUCLEOTIDE CONTAINING E-BOX SEQUENCE

Molecular Description:

Transcription factor 4/DNA Complex

Deposited:

2019-03-25

Released:

2019-05-29

Structural Keywords:

B DOUBLE HELIX

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Yang, J., Horton, J.R., Li, J., Huang, Y., Zhang, X., Blumenthal, R.M., Cheng, X.
Structural basis for preferential binding of human TCF4 to DNA containing 5-carboxylcytosine. 
Nucleic Acids Res., , pp. - , 2019.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 1

Cell Constants:

a = 36.614   b = 43.602   c = 43.557 (Ångstroms)

α = 97.17   β = 102.56   γ = 102.53 (degrees)

Refinement:

The structure was refined using the PHENIX program. The R value is 0.2242 for 25959 reflections in the resolution range 41.817 to 1.699 Ångstroms with Fobs >  1.96 sigma(Fobs) and with I >  0.0 sigma(I)