NDB ID: 6VEM    PDB ID: 6VEM 

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Title:

STRUCTURE OF RNA OCTAMER

Molecular Description:

Modified Octamer RNA

Deposited:

2020-01-02

Released:

2020-11-18

Structural Keywords:

A DOUBLE HELIX

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

No Protein Sequence Found

Primary Citation:

Mikami, A., Erande, N., Matsuda, S., Kel'in, A., Woods, L.B., Chickering, T., Pallan, P.S., Schlegel, M.K., Zlatev, I., Egli, M., Manoharan, M.
Synthesis, chirality-dependent conformational and biological properties of siRNAs containing 5'-(R)- and 5'-(S)-C-methyl-guanosine. 
Nucleic Acids Res., 48, pp. 10101 - 10124, 2020.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

P 61

Cell Constants:

a = 37.921   b = 37.921   c = 57.852 (Ångstroms)

α = 90.0   β = 90.0   γ = 120.0 (degrees)

Refinement:

The structure was refined using the REFMAC program. The R value is 0.1799 for 6392 reflections in the resolution range 21.72 to 1.56 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  0.0 sigma(I)

Download Data:

Asymmetric Unit coordinates (pdb format, Unix compressed(.gz))

Asymmetric Unit coordinates (cif format, Unix compressed(.gz))

Biological Assembly coordinates (pdb format) 1

Structure Factors (cif format)

Coordinates (pdb format, Unix compressed(.gz))

Coordinates (cif format, Unix compressed(.gz))

NMR Restraints (cif format, Unix compressed(.gz))

XML | Complete with coordinates (xml format, GNU compressed(.gz))

XML | Coordinates only (xml format, GNU compressed(.gz))

XML | Header only (xml format, GNU compressed(.gz))