NDB ID: 7CY6    PDB ID: 7CY6 

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Title:

CRYSTAL STRUCTURE OF CMD1 IN COMPLEX WITH 5MC-DNA

Molecular Description:

Maltodextrin-binding protein
5-methylcytosine-modifying enzyme 1/DNA Complex

Deposited:

2020-09-03

Released:

2020-12-30

Structural Keywords:

B DOUBLE HELIX, FLIPPED OUT BASES

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Li, W., Zhang, T., Sun, M., Shi, Y., Zhang, X., Xu, G., Ding, J.
Crystal structures of algal TET homologue CMD1 provide insight into the molecular mechanism for vitamin C-derived C5-glyceryl-methylcytosine DNA modification
To be published, , pp. - , 0.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

C 1 2 1

Cell Constants:

a = 153.173   b = 127.055   c = 64.217 (Ångstroms)

α = 90.0   β = 102.74   γ = 90.0 (degrees)

Refinement:

The structure was refined using the REFMAC program. The R value is 0.1846 for 59114 reflections in the resolution range 50.01 to 2.1 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  0.0 sigma(I)

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Biological Assembly coordinates (pdb format) 1

Structure Factors (cif format)

Coordinates (pdb format, Unix compressed(.gz))

Coordinates (cif format, Unix compressed(.gz))

NMR Restraints (cif format, Unix compressed(.gz))

XML | Complete with coordinates (xml format, GNU compressed(.gz))

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