A Portal for Three-dimensional Structural Information about Nucleic Acids
As of 13-Jan-2021 number of released structures: 11166
Search for released structures

NDB ID: 7CY8    PDB ID: 7CY8 


Title:

CRYSTAL STRUCTURE OF CMD1 IN COMPLEX WITH 5MC-DNA AND VITAMIN C

Molecular Description:

Maltodextrin-binding protein
5-methylcytosine-modifying enzyme 1/DNA Complex

Deposited:

2020-09-03

Released:

2020-12-30

Structural Keywords:

B DOUBLE HELIX

Nucleic Acid Sequence:

Click to show/hide 1 nucleic acid sequences

Protein Sequence:

Click to show/hide 1 protein sequences

Primary Citation:

Li, W., Zhang, T., Sun, M., Shi, Y., Zhang, X., Xu, G., Ding, J.
Crystal structures of algal TET homologue CMD1 provide insight into the molecular mechanism for vitamin C-derived C5-glyceryl-methylcytosine DNA modification
To be published, , pp. - , 0.

Experimental Information:

X-RAY DIFFRACTION

Space Group:

C 1 2 1

Cell Constants:

a = 154.488   b = 125.646   c = 64.058 (Ångstroms)

α = 90.0   β = 102.96   γ = 90.0 (degrees)

Refinement:

The structure was refined using the REFMAC program. The R value is 0.1923 for 33382 reflections in the resolution range 49.28 to 2.4 Ångstroms with Fobs >  0.0 sigma(Fobs) and with I >  0.0 sigma(I)